Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2025

Experiment: 2-Furfuraldehyde 0.125 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.125 vol%
2,418,285	-		Shewana3_2023	0.20	+0.4
2,418,398	-		Shewana3_2023	0.68	+0.4
2,418,408	+		Shewana3_2023	0.72	-1.1
2,418,425	+		Shewana3_2023	0.79	+1.6
2,418,425	+		Shewana3_2023	0.79	-0.9
2,418,464	-				-0.3
2,418,471	+				+0.4
2,418,567	+				+2.0
2,418,918	-				+2.0
2,418,986	+				+1.6
2,418,999	-				+2.4
2,419,075	+				+2.6
2,419,083	-				-0.3
2,419,123	+				+1.5
2,419,125	-				+1.0
2,419,131	-				+1.0
2,419,136	+				+0.4
2,419,144	-				+1.0
2,419,144	-				+1.0
2,419,278	+				+0.4
2,419,278	+				+0.4
2,419,278	+				-1.1
2,419,278	+				-0.1
2,419,286	-				+0.0
2,419,286	-				+2.0
2,419,606	-		Shewana3_2025	0.22	+1.0
2,419,641	+		Shewana3_2025	0.25	+0.4
2,419,720	+		Shewana3_2025	0.30	-0.6
2,420,398	-		Shewana3_2025	0.75	+2.0
2,420,447	+		Shewana3_2025	0.78	+2.0
2,420,455	-		Shewana3_2025	0.79	-1.1
2,420,489	-		Shewana3_2025	0.81	+0.4
2,420,707	+				+1.0
2,420,715	-				+2.0
2,421,051	-				+0.8
2,421,220	-		Shewana3_2026	0.11	+0.0
2,421,298	+		Shewana3_2026	0.14	+1.3
2,421,306	-		Shewana3_2026	0.14	+2.1
2,421,585	+		Shewana3_2026	0.22	+1.1
2,421,624	+		Shewana3_2026	0.23	-2.3
2,421,658	+		Shewana3_2026	0.24	+1.1
2,421,703	-		Shewana3_2026	0.26	+1.1