Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2016
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
2,404,608 | + | Shewana3_2015 | 0.73 | +0.8 | |
2,404,676 | + | Shewana3_2015 | 0.75 | +0.7 | |
2,404,694 | + | Shewana3_2015 | 0.75 | +1.0 | |
2,404,718 | + | Shewana3_2015 | 0.76 | +0.9 | |
2,404,810 | - | Shewana3_2015 | 0.79 | -2.0 | |
2,404,810 | - | Shewana3_2015 | 0.79 | +0.4 | |
2,404,810 | - | Shewana3_2015 | 0.79 | +1.1 | |
2,404,884 | + | Shewana3_2015 | 0.81 | -0.2 | |
2,405,008 | - | Shewana3_2015 | 0.85 | +2.0 | |
2,405,381 | - | +1.0 | |||
2,405,588 | - | +1.4 | |||
2,405,609 | + | +1.0 | |||
2,405,653 | - | +1.8 | |||
2,405,813 | + | Shewana3_2016 | 0.19 | +2.0 | |
2,405,821 | - | Shewana3_2016 | 0.19 | +2.0 | |
2,406,184 | - | Shewana3_2016 | 0.44 | +0.2 | |
2,406,241 | + | Shewana3_2016 | 0.48 | +0.0 | |
2,406,475 | - | Shewana3_2016 | 0.64 | +1.6 | |
2,406,563 | - | Shewana3_2016 | 0.70 | +1.0 | |
2,406,575 | - | Shewana3_2016 | 0.70 | +2.6 | |
2,407,030 | - | -0.8 | |||
2,407,163 | - | +0.7 | |||
2,407,888 | + | Shewana3_2017 | 0.40 | +1.0 |
Or see this region's nucleotide sequence