Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1958
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
2,329,342 | + | -2.1 | |||
2,329,526 | + | -0.8 | |||
2,329,700 | + | +0.0 | |||
2,330,537 | + | -0.0 | |||
2,330,582 | - | -1.2 | |||
2,330,737 | - | Shewana3_1958 | 0.16 | +2.0 | |
2,330,787 | + | Shewana3_1958 | 0.18 | +0.7 | |
2,330,922 | - | Shewana3_1958 | 0.23 | +1.0 | |
2,331,330 | + | Shewana3_1958 | 0.39 | +3.0 | |
2,331,706 | - | Shewana3_1958 | 0.54 | +2.0 | |
2,332,185 | - | Shewana3_1958 | 0.73 | +2.0 | |
2,332,301 | - | Shewana3_1958 | 0.77 | -0.6 | |
2,332,438 | - | Shewana3_1958 | 0.82 | +0.4 | |
2,332,547 | + | Shewana3_1958 | 0.87 | +1.4 | |
2,332,758 | + | +0.1 | |||
2,332,835 | + | +0.6 | |||
2,333,000 | - | +1.4 | |||
2,333,194 | - | Shewana3_1959 | 0.16 | +2.0 | |
2,333,213 | + | Shewana3_1959 | 0.19 | -1.2 | |
2,333,291 | + | Shewana3_1959 | 0.30 | +1.0 | |
2,333,432 | + | Shewana3_1959 | 0.51 | +1.0 | |
2,333,432 | + | Shewana3_1959 | 0.51 | +1.0 | |
2,333,705 | + | -0.6 |
Or see this region's nucleotide sequence