Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1929
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
2,292,769 | + | Shewana3_1927 | 0.54 | -0.6 | |
2,293,173 | + | Shewana3_1928 | 0.27 | -0.6 | |
2,293,173 | + | Shewana3_1928 | 0.27 | +1.2 | |
2,293,173 | + | Shewana3_1928 | 0.27 | -1.0 | |
2,293,181 | - | Shewana3_1928 | 0.28 | +2.0 | |
2,293,233 | + | Shewana3_1928 | 0.38 | +0.4 | |
2,293,241 | - | Shewana3_1928 | 0.40 | +2.0 | |
2,293,277 | + | Shewana3_1928 | 0.47 | +1.0 | |
2,293,387 | + | Shewana3_1928 | 0.68 | +1.0 | |
2,293,488 | + | Shewana3_1928 | 0.88 | +1.0 | |
2,293,764 | + | +2.0 | |||
2,294,126 | + | Shewana3_1929 | 0.82 | -1.7 | |
2,294,137 | + | Shewana3_1929 | 0.85 | -0.6 | |
2,294,601 | - | Shewana3_1930 | 0.40 | -0.3 | |
2,294,652 | + | Shewana3_1930 | 0.46 | +0.1 | |
2,294,746 | - | Shewana3_1930 | 0.57 | +0.4 | |
2,294,844 | - | Shewana3_1930 | 0.68 | -1.3 | |
2,294,985 | + | Shewana3_1930 | 0.83 | +1.1 |
Or see this region's nucleotide sequence