Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1923
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
2,285,237 | + | Shewana3_1922 | 0.38 | +1.0 | |
2,285,460 | - | Shewana3_1922 | 0.54 | +2.0 | |
2,285,511 | + | Shewana3_1922 | 0.58 | +0.7 | |
2,285,984 | - | -0.1 | |||
2,286,405 | + | Shewana3_1923 | 0.28 | -0.0 | |
2,286,490 | + | Shewana3_1923 | 0.38 | +0.2 | |
2,286,490 | + | Shewana3_1923 | 0.38 | -0.5 | |
2,286,498 | - | Shewana3_1923 | 0.39 | +0.3 | |
2,286,502 | - | Shewana3_1923 | 0.40 | -0.0 | |
2,286,534 | - | Shewana3_1923 | 0.44 | -0.0 | |
2,286,617 | + | Shewana3_1923 | 0.54 | -0.9 | |
2,286,630 | + | Shewana3_1923 | 0.56 | +1.8 | |
2,286,847 | - | Shewana3_1923 | 0.82 | +1.0 | |
2,286,877 | - | Shewana3_1923 | 0.86 | +1.0 | |
2,286,922 | + | +0.9 | |||
2,287,086 | - | +0.4 | |||
2,287,111 | + | +0.3 | |||
2,287,199 | + | -0.6 | |||
2,287,406 | + | -0.0 | |||
2,287,437 | - | +0.8 | |||
2,287,587 | - | Shewana3_1924 | 0.14 | -0.3 | |
2,287,666 | - | Shewana3_1924 | 0.18 | -0.5 | |
2,287,825 | - | Shewana3_1924 | 0.24 | -0.5 | |
2,287,945 | - | Shewana3_1924 | 0.29 | -0.7 |
Or see this region's nucleotide sequence