Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1911
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
2,266,999 | - | +1.4 | |||
2,266,999 | - | +0.7 | |||
2,267,192 | + | Shewana3_1910 | 0.20 | +0.4 | |
2,267,197 | + | Shewana3_1910 | 0.21 | +1.8 | |
2,267,200 | - | Shewana3_1910 | 0.21 | +1.4 | |
2,267,461 | + | Shewana3_1910 | 0.53 | +1.4 | |
2,267,463 | + | Shewana3_1910 | 0.53 | +1.0 | |
2,267,604 | - | Shewana3_1910 | 0.70 | -1.5 | |
2,267,621 | + | Shewana3_1910 | 0.72 | +0.4 | |
2,267,632 | - | Shewana3_1910 | 0.73 | +2.7 | |
2,267,651 | - | Shewana3_1910 | 0.76 | +0.2 | |
2,267,916 | + | -0.9 | |||
2,268,000 | - | Shewana3_1911 | 0.10 | -0.9 | |
2,268,049 | - | Shewana3_1911 | 0.17 | -1.3 | |
2,268,202 | - | Shewana3_1911 | 0.36 | -1.2 | |
2,268,287 | + | Shewana3_1911 | 0.47 | -1.0 | |
2,268,295 | - | Shewana3_1911 | 0.48 | -0.8 | |
2,268,368 | + | Shewana3_1911 | 0.57 | -2.5 | |
2,268,368 | + | Shewana3_1911 | 0.57 | -1.5 | |
2,268,460 | + | Shewana3_1911 | 0.69 | -2.3 | |
2,268,490 | + | Shewana3_1911 | 0.72 | +0.7 | |
2,268,625 | - | Shewana3_1911 | 0.90 | +0.2 | |
2,268,628 | + | -1.3 | |||
2,268,706 | - | -0.8 |
Or see this region's nucleotide sequence