Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1425
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
1,654,446 | - | Shewana3_1424 | 0.52 | -0.3 | |
1,654,868 | - | Shewana3_1424 | 0.78 | +0.5 | |
1,655,078 | + | -0.5 | |||
1,655,224 | - | -2.1 | |||
1,655,229 | + | +0.4 | |||
1,655,332 | + | -0.9 | |||
1,655,381 | + | +0.5 | |||
1,655,381 | + | -1.3 | |||
1,655,420 | + | Shewana3_1425 | 0.11 | -1.2 | |
1,655,428 | - | Shewana3_1425 | 0.12 | +1.7 | |
1,655,542 | + | Shewana3_1425 | 0.24 | -0.7 | |
1,655,550 | - | Shewana3_1425 | 0.25 | +0.7 | |
1,656,279 | + | -0.8 | |||
1,656,344 | + | +0.6 | |||
1,656,565 | + | Shewana3_1426 | 0.14 | +0.1 | |
1,656,673 | + | Shewana3_1426 | 0.23 | -1.1 | |
1,656,688 | + | Shewana3_1426 | 0.24 | +0.2 | |
1,656,731 | + | Shewana3_1426 | 0.27 | -1.1 | |
1,656,746 | + | Shewana3_1426 | 0.29 | -0.1 | |
1,656,866 | + | Shewana3_1426 | 0.38 | +0.2 | |
1,656,871 | + | Shewana3_1426 | 0.39 | -1.3 | |
1,656,871 | + | Shewana3_1426 | 0.39 | -0.9 | |
1,657,046 | - | Shewana3_1426 | 0.53 | -0.8 | |
1,657,048 | + | Shewana3_1426 | 0.53 | +0.9 | |
1,657,157 | - | Shewana3_1426 | 0.62 | -0.4 |
Or see this region's nucleotide sequence