Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1394
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
---|---|---|---|---|---|
remove | |||||
1,609,037 | + | Shewana3_1393 | 0.58 | +1.7 | |
1,609,199 | - | Shewana3_1393 | 0.65 | -0.3 | |
1,609,369 | - | Shewana3_1393 | 0.72 | +0.1 | |
1,609,533 | + | Shewana3_1393 | 0.79 | +1.7 | |
1,609,635 | + | Shewana3_1393 | 0.83 | +1.7 | |
1,609,687 | - | Shewana3_1393 | 0.85 | +0.9 | |
1,610,133 | - | Shewana3_1394 | 0.13 | -2.0 | |
1,610,252 | - | Shewana3_1394 | 0.28 | -1.3 | |
1,610,485 | - | Shewana3_1394 | 0.57 | +0.8 | |
1,610,583 | - | Shewana3_1394 | 0.70 | -2.8 | |
1,610,824 | + | +0.7 | |||
1,611,335 | + | Shewana3_1395 | 0.71 | +0.7 | |
1,611,402 | - | Shewana3_1395 | 0.80 | +0.7 | |
1,611,414 | - | Shewana3_1395 | 0.82 | +1.7 | |
1,611,456 | + | +1.7 | |||
1,611,484 | + | -0.9 | |||
1,611,717 | - | +0.9 |
Or see this region's nucleotide sequence