Strain Fitness in Shewanella loihica PV-4 around Shew_3776

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
4,493,812	-		Shew_3774	0.14	-0.0
4,493,819	-		Shew_3774	0.17	-0.4
4,494,028	-		Shew_3774	0.80	+0.2
4,494,039	-		Shew_3774	0.84	-0.2
4,494,039	-		Shew_3774	0.84	+1.1
4,494,182	+		Shew_3775	0.21	+1.1
4,494,196	-		Shew_3775	0.24	-0.4
4,494,461	+				+0.2
4,494,506	+				+0.2
4,494,645	+				-0.2
4,495,093	-		Shew_3776	0.24	+0.2
4,495,215	+		Shew_3776	0.31	+0.3
4,495,247	+		Shew_3776	0.33	+0.2
4,495,295	+		Shew_3776	0.35	-0.4
4,495,331	-		Shew_3776	0.37	-0.7
4,495,484	+		Shew_3776	0.46	-0.4
4,495,531	-		Shew_3776	0.48	-2.5
4,495,595	+		Shew_3776	0.52	+0.7
4,495,600	+		Shew_3776	0.52	-0.1
4,495,608	-		Shew_3776	0.53	-0.2
4,495,608	-		Shew_3776	0.53	-0.2
4,495,608	-		Shew_3776	0.53	+0.2
4,495,613	+		Shew_3776	0.53	-0.3
4,495,621	-		Shew_3776	0.53	-0.4
4,495,621	-		Shew_3776	0.53	-0.2
4,495,658	-		Shew_3776	0.55	-0.6
4,496,090	-		Shew_3776	0.80	-0.1
4,496,241	-		Shew_3776	0.88	+0.1
4,496,272	+		Shew_3776	0.90	-0.6
4,496,272	+		Shew_3776	0.90	-0.9
4,496,272	+		Shew_3776	0.90	+0.1
4,496,280	-				-0.2
4,496,371	+				-0.5
4,496,596	-				+0.2
4,496,789	+		Shew_3777	0.16	-0.9
4,496,789	+		Shew_3777	0.16	+0.8
4,496,925	+		Shew_3777	0.27	-1.5
4,496,995	-		Shew_3777	0.32	-0.5
4,496,996	+		Shew_3777	0.33	-0.4
4,497,041	+		Shew_3777	0.36	-0.0
4,497,054	+		Shew_3777	0.37	+0.4
4,497,054	+		Shew_3777	0.37	-0.8
4,497,054	+		Shew_3777	0.37	+0.1
4,497,067	-		Shew_3777	0.38	+1.7
4,497,072	-		Shew_3777	0.39	-0.2
4,497,163	+		Shew_3777	0.46	+0.1
4,497,319	-		Shew_3777	0.58	+1.7
4,497,455	-		Shew_3777	0.69	-0.2