Strain Fitness in Shewanella loihica PV-4 around Shew_3764

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
4,481,250	-		Shew_3762	0.82	+0.7
4,481,264	+		Shew_3762	0.83	+0.3
4,481,354	+				+0.1
4,481,362	-				+0.2
4,481,375	-				-0.3
4,481,392	-				-2.9
4,481,639	+		Shew_3763	0.31	-0.4
4,481,639	+		Shew_3763	0.31	+0.0
4,481,647	-		Shew_3763	0.32	-0.3
4,481,647	-		Shew_3763	0.32	+0.0
4,481,647	-		Shew_3763	0.32	+0.8
4,481,647	-		Shew_3763	0.32	-0.8
4,481,647	-		Shew_3763	0.32	-0.4
4,481,762	-		Shew_3763	0.54	-0.3
4,481,812	+		Shew_3763	0.63	-0.6
4,481,852	+		Shew_3763	0.71	-0.1
4,482,263	+				+0.2
4,482,458	+		Shew_3764	0.18	-0.1
4,482,475	-		Shew_3764	0.19	-0.4
4,482,589	-		Shew_3764	0.28	-0.4
4,482,621	+		Shew_3764	0.31	-0.1
4,482,739	-		Shew_3764	0.40	+0.8
4,482,790	+		Shew_3764	0.44	-0.1
4,482,983	-		Shew_3764	0.60	+0.3
4,483,128	+		Shew_3764	0.72	+0.4
4,483,281	+		Shew_3764	0.84	+0.3
4,483,287	+		Shew_3764	0.85	-0.2
4,483,316	+		Shew_3764	0.87	-0.2
4,483,414	-				+0.3
4,483,526	+				-0.1
4,483,718	+		Shew_3765	0.24	+0.2
4,483,766	+		Shew_3765	0.28	+0.6
4,483,774	-		Shew_3765	0.29	-1.3
4,483,774	-		Shew_3765	0.29	-0.7
4,483,774	-		Shew_3765	0.29	+0.2
4,483,774	-		Shew_3765	0.29	-0.6
4,483,774	-		Shew_3765	0.29	-0.4
4,483,784	-		Shew_3765	0.30	-1.0
4,484,050	-		Shew_3765	0.56	-0.5
4,484,318	-		Shew_3765	0.81	+0.0
4,484,329	+		Shew_3765	0.82	+0.2