Strain Fitness in Shewanella loihica PV-4 around Shew_3593

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
4,290,544	-		Shew_3592	0.40	-0.1
4,290,596	+		Shew_3592	0.43	+0.1
4,290,606	+		Shew_3592	0.44	+0.1
4,290,606	+		Shew_3592	0.44	-1.0
4,291,200	-		Shew_3592	0.86	-0.1
4,291,228	+		Shew_3592	0.88	+0.1
4,291,236	-		Shew_3592	0.89	-0.7
4,291,580	-		Shew_3593	0.18	-0.6
4,291,590	-		Shew_3593	0.20	-1.3
4,291,729	+		Shew_3593	0.39	+1.1
4,291,882	-		Shew_3593	0.60	-0.7
4,291,882	-		Shew_3593	0.60	-0.9
4,292,489	+		Shew_3594	0.31	+0.1
4,292,607	+		Shew_3594	0.54	+0.3
4,292,860	+				-0.3
4,292,868	-				+0.8
4,292,914	-				-0.3
4,293,034	+		Shew_3595	0.22	-0.0
4,293,161	+		Shew_3595	0.50	+0.4
4,293,161	+		Shew_3595	0.50	-0.2