Strain Fitness in Shewanella loihica PV-4 around Shew_3054

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,625,843	-		Shew_3053	0.56	-0.1
3,625,897	+		Shew_3053	0.60	+0.3
3,626,128	-		Shew_3053	0.78	+0.3
3,626,353	+				+0.2
3,626,362	+				-0.0
3,626,370	-				-0.3
3,626,491	+				-1.7
3,626,627	-				-0.0
3,626,666	+				+0.0
3,626,789	+		Shew_3054	0.31	+0.9
3,627,006	-		Shew_3054	0.69	-0.1
3,627,300	-				-0.1
3,627,316	-				-0.7
3,627,342	+				+0.2
3,627,750	+		Shew_3055	0.68	-3.8
3,627,768	+		Shew_3055	0.72	-3.7
3,627,809	-		Shew_3055	0.81	-3.2
3,627,839	-		Shew_3055	0.88	-3.9
3,627,868	+				+0.2
3,627,868	+				-0.2
3,627,885	-				+0.8
3,627,887	+				+0.7
3,627,887	+				+0.4
3,627,895	-				-0.0
3,627,895	-				+0.0
3,627,895	-				-2.8
3,627,895	-				+0.1
3,627,897	+				+0.0
3,627,944	+				+0.7
3,628,134	+		Shew_3056	0.18	+0.7
3,628,139	+		Shew_3056	0.18	-0.2
3,628,142	-		Shew_3056	0.19	-0.0
3,628,147	-		Shew_3056	0.20	-0.1
3,628,147	-		Shew_3056	0.20	+0.7
3,628,164	+		Shew_3056	0.23	+0.1
3,628,172	-		Shew_3056	0.24	-0.3
3,628,185	-		Shew_3056	0.27	+0.4
3,628,187	-		Shew_3056	0.27	-0.0