Strain Fitness in Shewanella loihica PV-4 around Shew_2967

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
3,519,064	-		Shew_2966	0.20	+0.0
3,519,707	+				+0.8
3,519,774	+				+0.9
3,519,973	-				+0.6
3,519,992	-		Shew_2967	0.11	-0.9
3,520,215	-		Shew_2967	0.19	+1.2
3,520,299	+		Shew_2967	0.23	+0.9
3,520,307	-		Shew_2967	0.23	+1.5
3,520,307	-		Shew_2967	0.23	+0.1
3,520,307	-		Shew_2967	0.23	+0.1
3,520,930	-		Shew_2967	0.47	+0.3
3,520,930	-		Shew_2967	0.47	+0.4
3,521,340	+		Shew_2967	0.63	+1.8
3,521,341	+		Shew_2967	0.63	+0.0
3,521,541	+		Shew_2967	0.71	+0.2
3,521,634	+		Shew_2967	0.75	-0.2
3,521,634	+		Shew_2967	0.75	+0.3
3,521,684	-		Shew_2967	0.76	-0.0
3,522,238	+				+0.0
3,522,238	+				+0.2
3,522,246	-				-0.3
3,522,414	-				-1.5
3,522,511	+				+0.1
3,523,115	+				-0.5
3,523,161	+				-0.1
3,523,200	+				-0.6
3,523,200	+				-0.1
3,523,208	-				-1.1
3,523,218	-				-0.1
3,523,255	+				-0.6