Strain Fitness in Shewanella loihica PV-4 around Shew_2576
Experiment: Spectinomycin 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,035,162 | - | +0.9 | |||
3,036,139 | - | Shew_2576 | 0.30 | -0.8 | |
3,036,202 | - | Shew_2576 | 0.40 | -1.8 | |
3,036,597 | - | -0.6 | |||
3,036,786 | + | -2.3 | |||
3,036,786 | - | +0.1 | |||
3,036,804 | - | -0.1 | |||
3,036,893 | - | Shew_2577 | 0.13 | -0.4 | |
3,037,329 | - | Shew_2577 | 0.41 | +0.5 | |
3,037,381 | - | Shew_2577 | 0.44 | -0.2 |
Or see this region's nucleotide sequence