Strain Fitness in Shewanella loihica PV-4 around Shew_0068

Experiment: Spectinomycin 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 10 mg/ml
80,040	+		Shew_0066	0.42	+0.2
80,040	+		Shew_0066	0.42	-0.1
80,048	-		Shew_0066	0.45	+0.2
80,110	+		Shew_0066	0.61	-0.2
80,118	-		Shew_0066	0.64	-1.2
80,118	-		Shew_0066	0.64	+0.2
80,209	-		Shew_0066	0.89	-0.1
80,806	+				-0.5
80,914	-				+0.2
81,325	+		Shew_0068	0.25	-0.2
81,361	+		Shew_0068	0.28	+0.3
81,361	+		Shew_0068	0.28	-0.3
81,399	+		Shew_0068	0.31	+0.1
81,399	+		Shew_0068	0.31	-0.1
81,407	-		Shew_0068	0.31	-0.0
81,690	-		Shew_0068	0.52	-0.1
81,797	+		Shew_0068	0.59	-0.9
81,871	+		Shew_0068	0.65	-0.7
81,888	-		Shew_0068	0.66	-1.3
81,937	-		Shew_0068	0.70	-0.1
82,068	-		Shew_0068	0.79	+0.0
82,195	+		Shew_0068	0.88	-0.1
82,386	+				+0.2
82,389	-				+0.0
82,413	+				+0.1
82,416	-				-0.4
82,471	+				-1.1
82,471	+				+0.2
82,671	-		Shew_0069	0.25	+0.3
82,671	-		Shew_0069	0.25	-0.4
82,853	-		Shew_0069	0.41	+0.1
82,881	-		Shew_0069	0.44	-0.3
83,228	+		Shew_0069	0.75	-0.4
83,235	-		Shew_0069	0.76	+0.1
83,235	-		Shew_0069	0.76	-0.3
83,309	-		Shew_0069	0.82	-0.0