Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5581

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
6,398,830	+		Pf6N2E2_5579	0.89	-0.6
6,398,831	-		Pf6N2E2_5579	0.89	-0.6
6,398,831	-		Pf6N2E2_5579	0.89	-0.6
6,398,831	-		Pf6N2E2_5579	0.89	+0.8
6,398,953	-				+0.9
6,399,051	+				-0.4
6,399,051	+				-1.0
6,399,058	-				+0.1
6,399,072	-				+0.2
6,399,072	-				+1.3
6,399,131	+				-0.6
6,399,131	+				+0.7
6,399,131	+				+0.3
6,399,131	+				+1.3
6,399,131	+				+0.3
6,399,132	-				+0.5
6,399,132	-				+1.4
6,399,132	-				-1.3
6,399,132	-				+0.5
6,399,132	-				+0.5
6,399,169	+				+0.1
6,399,170	-				-0.2
6,399,305	+				+0.6
6,399,306	-				+0.3
6,399,307	+				+0.2
6,399,307	+				-1.9
6,399,307	+				+1.1
6,399,307	+				-0.2
6,399,307	+				+0.4
6,399,308	-				+0.3
6,399,308	-				+0.3
6,399,308	-				+0.0
6,399,308	-				-0.4
6,399,308	-				+1.1
6,399,308	-				+0.9
6,399,703	+				+0.9
6,399,703	+				-0.5
6,399,704	-				+1.1
6,399,704	-				-0.9
6,399,741	-				-0.2
6,399,931	-				-0.3
6,400,078	+		Pf6N2E2_5581	0.15	-0.2
6,400,079	-		Pf6N2E2_5581	0.15	-0.4
6,400,079	-		Pf6N2E2_5581	0.15	-2.2
6,400,101	+		Pf6N2E2_5581	0.16	-2.0
6,400,101	+		Pf6N2E2_5581	0.16	-0.9
6,400,101	+		Pf6N2E2_5581	0.16	-0.3
6,400,101	+		Pf6N2E2_5581	0.16	+1.1
6,400,102	-		Pf6N2E2_5581	0.16	-2.3
6,400,102	-		Pf6N2E2_5581	0.16	+0.1
6,400,102	-		Pf6N2E2_5581	0.16	+0.8
6,400,102	-		Pf6N2E2_5581	0.16	-3.0
6,400,102	-		Pf6N2E2_5581	0.16	-1.8
6,400,102	-		Pf6N2E2_5581	0.16	+0.1
6,400,102	-		Pf6N2E2_5581	0.16	+1.6
6,400,102	-		Pf6N2E2_5581	0.16	-1.2
6,400,102	-		Pf6N2E2_5581	0.16	+1.2
6,400,106	-		Pf6N2E2_5581	0.17	+1.0
6,400,106	-		Pf6N2E2_5581	0.17	+1.3
6,400,129	+		Pf6N2E2_5581	0.18	+1.0
6,400,129	+		Pf6N2E2_5581	0.18	-0.2
6,400,129	+		Pf6N2E2_5581	0.18	+0.3
6,400,129	+		Pf6N2E2_5581	0.18	+0.0
6,400,129	+		Pf6N2E2_5581	0.18	+0.8
6,400,130	-		Pf6N2E2_5581	0.18	+0.9
6,400,130	-		Pf6N2E2_5581	0.18	+0.3
6,400,130	-		Pf6N2E2_5581	0.18	+0.5
6,400,130	-		Pf6N2E2_5581	0.18	+0.3
6,400,207	+		Pf6N2E2_5581	0.21	+0.5
6,400,207	+		Pf6N2E2_5581	0.21	+0.1
6,400,207	+		Pf6N2E2_5581	0.21	+0.4
6,400,207	+		Pf6N2E2_5581	0.21	+0.7
6,400,207	+		Pf6N2E2_5581	0.21	+0.8
6,400,207	+		Pf6N2E2_5581	0.21	-0.8
6,400,208	-		Pf6N2E2_5581	0.21	-1.8
6,400,216	+		Pf6N2E2_5581	0.22	-0.0
6,400,216	+		Pf6N2E2_5581	0.22	+1.2
6,400,216	+		Pf6N2E2_5581	0.22	-1.5
6,400,216	+		Pf6N2E2_5581	0.22	-0.4
6,400,216	+		Pf6N2E2_5581	0.22	-0.4
6,400,217	-		Pf6N2E2_5581	0.22	-0.8
6,400,217	-		Pf6N2E2_5581	0.22	+0.2
6,400,217	-		Pf6N2E2_5581	0.22	+0.4
6,400,217	-		Pf6N2E2_5581	0.22	-0.2
6,400,217	-		Pf6N2E2_5581	0.22	-0.7
6,400,431	-		Pf6N2E2_5581	0.32	+0.0
6,400,651	+		Pf6N2E2_5581	0.42	+1.6
6,401,017	+		Pf6N2E2_5581	0.60	+0.6
6,401,017	+		Pf6N2E2_5581	0.60	-0.6
6,401,017	+		Pf6N2E2_5581	0.60	+0.7
6,401,018	-		Pf6N2E2_5581	0.60	+1.4
6,401,018	-		Pf6N2E2_5581	0.60	-0.6
6,401,018	-		Pf6N2E2_5581	0.60	+0.7
6,401,018	-		Pf6N2E2_5581	0.60	+0.7
6,401,018	-		Pf6N2E2_5581	0.60	-0.4
6,401,018	-		Pf6N2E2_5581	0.60	-1.9
6,401,086	+		Pf6N2E2_5581	0.63	-0.2
6,401,086	+		Pf6N2E2_5581	0.63	-2.1
6,401,086	+		Pf6N2E2_5581	0.63	+0.1
6,401,086	+		Pf6N2E2_5581	0.63	+0.5
6,401,086	+		Pf6N2E2_5581	0.63	+0.6
6,401,087	-		Pf6N2E2_5581	0.63	+1.0
6,401,287	+		Pf6N2E2_5581	0.73	+3.0
6,401,288	-		Pf6N2E2_5581	0.73	-2.3
6,401,288	-		Pf6N2E2_5581	0.73	+0.0
6,401,307	+		Pf6N2E2_5581	0.73	-2.2
6,401,307	+		Pf6N2E2_5581	0.73	-1.0
6,401,307	+		Pf6N2E2_5581	0.73	+0.4
6,401,307	+		Pf6N2E2_5581	0.73	-1.0
6,401,308	-		Pf6N2E2_5581	0.74	+0.8
6,401,429	+		Pf6N2E2_5581	0.79	-0.7
6,401,429	+		Pf6N2E2_5581	0.79	-0.4
6,401,429	+		Pf6N2E2_5581	0.79	+1.0
6,401,429	+		Pf6N2E2_5581	0.79	+1.7
6,401,429	+		Pf6N2E2_5581	0.79	-0.0
6,401,430	-		Pf6N2E2_5581	0.79	+0.5
6,401,430	-		Pf6N2E2_5581	0.79	-0.4
6,401,517	+		Pf6N2E2_5581	0.83	+0.2
6,401,517	+		Pf6N2E2_5581	0.83	-2.5
6,401,518	-		Pf6N2E2_5581	0.83	-1.3
6,401,518	-		Pf6N2E2_5581	0.83	+0.4
6,401,518	-		Pf6N2E2_5581	0.83	-0.5
6,401,532	+		Pf6N2E2_5581	0.84	-0.8
6,401,532	+		Pf6N2E2_5581	0.84	+1.8
6,401,532	+		Pf6N2E2_5581	0.84	-0.8
6,401,533	-		Pf6N2E2_5581	0.84	-0.8
6,401,533	-		Pf6N2E2_5581	0.84	-1.1
6,401,533	-		Pf6N2E2_5581	0.84	-0.1
6,401,833	-				-0.2
6,401,863	+				+0.8
6,401,897	+				-0.6
6,401,897	+				-0.2
6,401,923	+				-1.1
6,401,923	+				-0.4
6,401,923	+				-0.5
6,401,923	+				+0.9
6,401,923	+				-1.5
6,401,923	+				+0.6
6,401,923	+				-1.7
6,401,923	+				-0.2
6,402,263	-				+0.1
6,402,307	+				-0.2
6,402,307	+				+0.5
6,402,307	+				-1.0
6,402,307	+				+1.9
6,402,307	+				+0.3
6,402,307	+				+1.7
6,402,307	+				+1.4
6,402,307	+				-0.3
6,402,307	+				+0.8
6,402,307	+				-0.8
6,402,307	+				+0.4
6,402,307	+				+0.3
6,402,307	+				+0.8
6,402,307	+				+0.4
6,402,307	+				-1.1
6,402,307	+				+0.4
6,402,307	+				+2.2
6,402,307	+				+1.0
6,402,307	+				-0.6
6,402,307	+				+1.1
6,402,307	+				+0.2
6,402,308	-				-0.6
6,402,308	-				-0.1
6,402,308	-				+2.6
6,402,308	-				-0.5
6,402,401	+				+0.4
6,402,402	-				+0.4
6,402,404	+				+0.4
6,402,404	+				+1.1
6,402,404	+				-2.5
6,402,441	+				-0.3
6,402,441	+				+1.4
6,402,442	-				+0.7
6,402,465	+				+0.3
6,402,466	-				+0.7
6,402,466	-				-1.3
6,402,466	-				+0.5
6,402,492	+				+1.0
6,402,492	+				-0.1
6,402,492	+				-0.4
6,402,493	-				+0.2
6,402,691	+		Pf6N2E2_5583	0.48	+0.7
6,402,691	+		Pf6N2E2_5583	0.48	-1.7
6,402,692	-		Pf6N2E2_5583	0.48	-1.5
6,402,804	+		Pf6N2E2_5583	0.72	-0.5
6,402,805	-		Pf6N2E2_5583	0.72	+0.1
6,402,841	+		Pf6N2E2_5583	0.80	-0.4
6,402,843	+		Pf6N2E2_5583	0.80	+1.0
6,402,843	+		Pf6N2E2_5583	0.80	-1.4
6,402,843	+		Pf6N2E2_5583	0.80	-1.1
6,402,844	-		Pf6N2E2_5583	0.80	-0.8
6,402,844	-		Pf6N2E2_5583	0.80	+0.2
6,402,864	+		Pf6N2E2_5583	0.84	-1.0
6,402,864	+		Pf6N2E2_5583	0.84	-0.2
6,402,864	+		Pf6N2E2_5583	0.84	+1.5
6,402,864	+		Pf6N2E2_5583	0.84	+0.1
6,402,865	-		Pf6N2E2_5583	0.85	-0.1