Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4232

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
4,921,200	+				-0.7
4,921,200	+				-1.2
4,921,322	+		Pf6N2E2_4231	0.22	+1.5
4,921,322	+		Pf6N2E2_4231	0.22	-0.8
4,921,323	-		Pf6N2E2_4231	0.22	+0.6
4,921,323	-		Pf6N2E2_4231	0.22	-0.1
4,921,363	+		Pf6N2E2_4231	0.26	-0.8
4,921,363	+		Pf6N2E2_4231	0.26	+1.0
4,921,366	+		Pf6N2E2_4231	0.27	-0.9
4,921,366	+		Pf6N2E2_4231	0.27	+0.0
4,921,366	+		Pf6N2E2_4231	0.27	+0.6
4,921,367	-		Pf6N2E2_4231	0.27	-1.0
4,921,386	+		Pf6N2E2_4231	0.29	-1.0
4,921,386	+		Pf6N2E2_4231	0.29	+1.1
4,921,386	+		Pf6N2E2_4231	0.29	+0.1
4,921,386	+		Pf6N2E2_4231	0.29	+0.0
4,921,386	+		Pf6N2E2_4231	0.29	-0.0
4,921,386	+		Pf6N2E2_4231	0.29	+0.0
4,921,386	+		Pf6N2E2_4231	0.29	-2.4
4,921,386	+		Pf6N2E2_4231	0.29	-0.4
4,921,386	+		Pf6N2E2_4231	0.29	+0.0
4,921,386	+		Pf6N2E2_4231	0.29	-0.2
4,921,386	+		Pf6N2E2_4231	0.29	-1.4
4,921,387	-		Pf6N2E2_4231	0.29	-0.8
4,921,387	-		Pf6N2E2_4231	0.29	-0.7
4,921,387	-		Pf6N2E2_4231	0.29	+0.5
4,921,387	-		Pf6N2E2_4231	0.29	+2.1
4,921,387	-		Pf6N2E2_4231	0.29	+0.1
4,921,387	-		Pf6N2E2_4231	0.29	+1.7
4,921,387	-		Pf6N2E2_4231	0.29	+1.6
4,921,387	-		Pf6N2E2_4231	0.29	-0.3
4,921,387	-		Pf6N2E2_4231	0.29	+0.0
4,921,387	-		Pf6N2E2_4231	0.29	+3.4
4,921,387	-		Pf6N2E2_4231	0.29	-0.4
4,921,392	+		Pf6N2E2_4231	0.29	-1.8
4,921,392	+		Pf6N2E2_4231	0.29	-0.4
4,921,392	+		Pf6N2E2_4231	0.29	+0.3
4,921,392	+		Pf6N2E2_4231	0.29	+0.8
4,921,392	+		Pf6N2E2_4231	0.29	-1.3
4,921,392	+		Pf6N2E2_4231	0.29	-0.5
4,921,392	+		Pf6N2E2_4231	0.29	-0.0
4,921,392	+		Pf6N2E2_4231	0.29	-1.7
4,921,392	+		Pf6N2E2_4231	0.29	-0.7
4,921,392	+		Pf6N2E2_4231	0.29	-1.4
4,921,392	+		Pf6N2E2_4231	0.29	+0.2
4,921,392	+		Pf6N2E2_4231	0.29	-1.5
4,921,392	+		Pf6N2E2_4231	0.29	+1.8
4,921,392	+		Pf6N2E2_4231	0.29	+0.2
4,921,393	-		Pf6N2E2_4231	0.29	-0.6
4,921,393	-		Pf6N2E2_4231	0.29	-1.0
4,921,393	-		Pf6N2E2_4231	0.29	+0.3
4,921,435	-		Pf6N2E2_4231	0.34	+0.8
4,921,608	+		Pf6N2E2_4231	0.53	+2.5
4,921,617	+		Pf6N2E2_4231	0.54	+0.7
4,921,617	+		Pf6N2E2_4231	0.54	+0.1
4,921,618	-		Pf6N2E2_4231	0.54	-0.1
4,921,703	-		Pf6N2E2_4231	0.63	+0.5
4,921,815	+		Pf6N2E2_4231	0.75	+0.9
4,921,815	+		Pf6N2E2_4231	0.75	-0.5
4,921,816	-		Pf6N2E2_4231	0.75	-0.3
4,921,816	-		Pf6N2E2_4231	0.75	+1.4
4,921,909	-		Pf6N2E2_4231	0.85	-0.9
4,921,976	+				-0.9
4,921,976	+				+0.6
4,921,977	-				-0.1
4,922,040	-				+0.1
4,922,051	+				-0.8
4,922,052	-				-0.9
4,922,052	-				-2.0
4,922,186	-				-1.1
4,922,186	-				-0.0
4,922,335	+		Pf6N2E2_4232	0.23	+1.5
4,922,336	-		Pf6N2E2_4232	0.23	-0.8
4,922,336	-		Pf6N2E2_4232	0.23	-0.6
4,922,362	+		Pf6N2E2_4232	0.25	+2.6
4,922,363	-		Pf6N2E2_4232	0.26	+0.1
4,922,363	-		Pf6N2E2_4232	0.26	-1.0
4,922,373	+		Pf6N2E2_4232	0.27	+0.9
4,922,440	+		Pf6N2E2_4232	0.33	+0.3
4,922,440	+		Pf6N2E2_4232	0.33	+0.3
4,922,440	+		Pf6N2E2_4232	0.33	+1.1
4,922,440	+		Pf6N2E2_4232	0.33	+0.1
4,922,440	+		Pf6N2E2_4232	0.33	+1.4
4,922,440	+		Pf6N2E2_4232	0.33	-1.0
4,922,440	+		Pf6N2E2_4232	0.33	-0.2
4,922,440	+		Pf6N2E2_4232	0.33	+0.9
4,922,441	-		Pf6N2E2_4232	0.33	-1.6
4,922,441	-		Pf6N2E2_4232	0.33	-2.0
4,922,441	-		Pf6N2E2_4232	0.33	-0.5
4,922,441	-		Pf6N2E2_4232	0.33	-0.8
4,922,484	+		Pf6N2E2_4232	0.38	-2.2
4,922,501	+		Pf6N2E2_4232	0.39	-0.9
4,922,551	+		Pf6N2E2_4232	0.45	+0.4
4,922,552	-		Pf6N2E2_4232	0.45	+0.2
4,922,623	+		Pf6N2E2_4232	0.52	+0.3
4,922,710	+		Pf6N2E2_4232	0.61	+2.0
4,922,711	-		Pf6N2E2_4232	0.61	-0.4
4,922,753	+		Pf6N2E2_4232	0.65	-0.8
4,922,753	+		Pf6N2E2_4232	0.65	+0.1
4,922,754	-		Pf6N2E2_4232	0.65	+0.8
4,922,882	+		Pf6N2E2_4232	0.78	+0.2
4,922,882	+		Pf6N2E2_4232	0.78	+1.9
4,922,882	+		Pf6N2E2_4232	0.78	+0.4
4,922,882	+		Pf6N2E2_4232	0.78	-1.6
4,922,882	+		Pf6N2E2_4232	0.78	+1.1
4,922,882	+		Pf6N2E2_4232	0.78	-2.4
4,922,882	+		Pf6N2E2_4232	0.78	-0.1
4,922,882	+		Pf6N2E2_4232	0.78	+0.4
4,922,882	+		Pf6N2E2_4232	0.78	+1.1
4,922,883	-		Pf6N2E2_4232	0.78	-0.5
4,922,883	-		Pf6N2E2_4232	0.78	+1.6
4,922,883	-		Pf6N2E2_4232	0.78	-1.3
4,922,883	-		Pf6N2E2_4232	0.78	+1.5
4,922,883	-		Pf6N2E2_4232	0.78	-0.2
4,922,883	-		Pf6N2E2_4232	0.78	+0.0
4,922,883	-		Pf6N2E2_4232	0.78	-0.6
4,922,883	-		Pf6N2E2_4232	0.78	+1.8
4,922,886	+		Pf6N2E2_4232	0.78	+0.6
4,922,886	+		Pf6N2E2_4232	0.78	-0.4
4,922,887	-		Pf6N2E2_4232	0.78	+0.5
4,922,956	+		Pf6N2E2_4232	0.85	+0.8
4,922,957	-		Pf6N2E2_4232	0.86	+0.1
4,922,957	-		Pf6N2E2_4232	0.86	+0.8
4,922,957	-		Pf6N2E2_4232	0.86	-1.7
4,922,990	-		Pf6N2E2_4232	0.89	+0.5
4,923,001	+				-1.1
4,923,001	+				+0.1
4,923,001	+				-1.7
4,923,002	-				-0.8
4,923,002	-				+0.7
4,923,002	-				-1.0
4,923,044	+				+0.2
4,923,044	+				-1.2
4,923,119	+				+0.9
4,923,119	+				-1.7
4,923,119	+				-0.1
4,923,120	-				-0.2
4,923,120	-				+0.2
4,923,120	-				-0.3
4,923,120	-				-0.0
4,923,195	+				-1.4
4,923,196	-				-1.2
4,923,196	-				-0.0
4,923,420	+		Pf6N2E2_4233	0.12	-2.6
4,923,420	+		Pf6N2E2_4233	0.12	+0.8
4,923,421	-		Pf6N2E2_4233	0.12	-1.8
4,923,421	-		Pf6N2E2_4233	0.12	+1.0
4,923,421	-		Pf6N2E2_4233	0.12	-0.4
4,923,421	-		Pf6N2E2_4233	0.12	+0.5
4,923,421	-		Pf6N2E2_4233	0.12	-1.5
4,923,421	-		Pf6N2E2_4233	0.12	+0.2
4,923,496	-		Pf6N2E2_4233	0.15	-1.9
4,923,496	-		Pf6N2E2_4233	0.15	-0.6
4,923,563	-		Pf6N2E2_4233	0.18	-1.9
4,923,576	+		Pf6N2E2_4233	0.19	-2.3
4,923,576	+		Pf6N2E2_4233	0.19	-1.7
4,923,577	-		Pf6N2E2_4233	0.19	-0.8
4,923,661	-		Pf6N2E2_4233	0.23	-0.3
4,923,661	-				+2.8
4,923,661	-		Pf6N2E2_4233	0.23	-0.8
4,923,672	+		Pf6N2E2_4233	0.23	-1.2
4,923,673	-		Pf6N2E2_4233	0.23	+0.8
4,923,673	-		Pf6N2E2_4233	0.23	-1.4
4,923,673	-		Pf6N2E2_4233	0.23	+0.4
4,923,708	+		Pf6N2E2_4233	0.25	-0.6
4,923,708	+		Pf6N2E2_4233	0.25	-1.2
4,923,709	-		Pf6N2E2_4233	0.25	-0.3
4,923,709	-		Pf6N2E2_4233	0.25	+0.6
4,923,709	-		Pf6N2E2_4233	0.25	+0.9
4,923,709	-		Pf6N2E2_4233	0.25	-2.2
4,923,709	-		Pf6N2E2_4233	0.25	+0.9
4,923,711	+		Pf6N2E2_4233	0.25	-1.0
4,923,748	+		Pf6N2E2_4233	0.26	-1.2
4,923,748	+		Pf6N2E2_4233	0.26	+0.0
4,923,748	+		Pf6N2E2_4233	0.26	+0.2
4,923,749	-		Pf6N2E2_4233	0.26	+0.0
4,923,749	-		Pf6N2E2_4233	0.26	+0.1
4,923,749	-		Pf6N2E2_4233	0.26	-1.8
4,923,856	+		Pf6N2E2_4233	0.31	-0.1
4,923,856	+		Pf6N2E2_4233	0.31	-3.1
4,923,857	-		Pf6N2E2_4233	0.31	-0.4
4,923,867	+		Pf6N2E2_4233	0.32	-0.2
4,923,867	+		Pf6N2E2_4233	0.32	+0.1
4,923,867	+		Pf6N2E2_4233	0.32	-0.8
4,923,867	+		Pf6N2E2_4233	0.32	-1.7
4,923,868	-		Pf6N2E2_4233	0.32	-0.8
4,923,903	+		Pf6N2E2_4233	0.33	-0.4
4,923,903	+		Pf6N2E2_4233	0.33	-0.9
4,924,086	+		Pf6N2E2_4233	0.41	-1.1
4,924,086	+		Pf6N2E2_4233	0.41	+0.2
4,924,087	-		Pf6N2E2_4233	0.41	-1.6
4,924,087	-		Pf6N2E2_4233	0.41	-0.2
4,924,087	-		Pf6N2E2_4233	0.41	+0.3
4,924,087	-		Pf6N2E2_4233	0.41	-2.2
4,924,091	+		Pf6N2E2_4233	0.42	+0.8
4,924,091	+		Pf6N2E2_4233	0.42	-1.5
4,924,092	-		Pf6N2E2_4233	0.42	-2.4
4,924,092	-		Pf6N2E2_4233	0.42	-1.1