Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3861

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
4,492,325	+		Pf6N2E2_3860	0.32	+0.3
4,492,325	+		Pf6N2E2_3860	0.32	-0.2
4,492,326	-		Pf6N2E2_3860	0.32	+0.5
4,492,326	-		Pf6N2E2_3860	0.32	+0.3
4,492,326	-		Pf6N2E2_3860	0.32	-1.0
4,492,326	-		Pf6N2E2_3860	0.32	-0.5
4,492,326	-		Pf6N2E2_3860	0.32	+0.6
4,492,357	-		Pf6N2E2_3860	0.36	+0.5
4,492,451	+		Pf6N2E2_3860	0.47	+0.8
4,492,451	+		Pf6N2E2_3860	0.47	+0.4
4,492,616	+		Pf6N2E2_3860	0.67	+0.2
4,492,617	-		Pf6N2E2_3860	0.67	+0.2
4,492,649	+		Pf6N2E2_3860	0.71	+0.5
4,492,649	+		Pf6N2E2_3860	0.71	+0.2
4,492,649	+		Pf6N2E2_3860	0.71	-2.0
4,492,650	-		Pf6N2E2_3860	0.71	+0.5
4,492,650	-		Pf6N2E2_3860	0.71	-0.7
4,492,650	-		Pf6N2E2_3860	0.71	+0.8
4,492,650	-		Pf6N2E2_3860	0.71	-2.5
4,492,650	-		Pf6N2E2_3860	0.71	-0.3
4,492,650	-		Pf6N2E2_3860	0.71	+1.0
4,492,650	-		Pf6N2E2_3860	0.71	-0.1
4,492,650	-		Pf6N2E2_3860	0.71	+0.4
4,492,650	-		Pf6N2E2_3860	0.71	-0.3
4,492,650	-		Pf6N2E2_3860	0.71	+0.8
4,492,652	+		Pf6N2E2_3860	0.71	-0.4
4,492,652	+		Pf6N2E2_3860	0.71	+0.3
4,492,652	+		Pf6N2E2_3860	0.71	+0.4
4,492,652	+		Pf6N2E2_3860	0.71	-0.6
4,492,653	-		Pf6N2E2_3860	0.71	-0.9
4,492,653	-		Pf6N2E2_3860	0.71	-0.1
4,492,653	-		Pf6N2E2_3860	0.71	+0.9
4,493,040	+				+1.9
4,493,040	+				+1.1
4,493,058	+				+1.3
4,493,101	+				+0.8
4,493,101	+				-1.5
4,493,101	+				+0.2
4,493,101	+				-1.2
4,493,102	-				-1.1
4,493,102	-				-2.4
4,493,102	-				+0.7
4,493,108	+				+0.2
4,493,108	+				-1.4
4,493,108	+				+0.3
4,493,108	+				-0.3
4,493,108	+				-0.5
4,493,109	-				-1.1
4,493,109	-				-1.9
4,493,112	+				+0.6
4,493,112	+				+0.3
4,493,112	+				-2.1
4,493,112	+				-1.5
4,493,113	-				+0.4
4,493,113	-				-1.0
4,493,113	-				+1.0
4,493,113	-				+0.5
4,493,166	+				-1.4
4,493,208	+				-0.7
4,493,218	+				-0.5
4,493,218	+				+0.4
4,493,218	+				+0.1
4,493,218	+				-0.3
4,493,218	+				+0.8
4,493,218	+				-1.6
4,493,218	+				-0.1
4,493,218	+				+0.7
4,493,218	+				+1.3
4,493,220	+				+0.1
4,493,220	+				-0.0
4,493,220	+				+0.8
4,493,223	+				-0.4
4,493,223	+				-2.2
4,493,223	+				-0.3
4,493,223	+				+1.2
4,493,306	-				+1.6
4,493,306	-				-2.7
4,493,306	-				-2.2
4,493,306	-				+0.4
4,493,306	-				+2.4
4,493,306	-				+0.2
4,493,339	+				-0.7
4,493,339	+				+0.3
4,493,340	-				-0.2
4,493,340	-				+1.6
4,493,360	+				-0.9
4,493,361	-				+0.0
4,493,443	+		Pf6N2E2_3861	0.14	-1.7
4,493,443	+		Pf6N2E2_3861	0.14	+2.4
4,493,443	+		Pf6N2E2_3861	0.14	+0.9
4,493,444	-		Pf6N2E2_3861	0.14	+0.7
4,493,444	-		Pf6N2E2_3861	0.14	+0.8
4,493,517	+		Pf6N2E2_3861	0.21	+1.5
4,493,517	+		Pf6N2E2_3861	0.21	+0.6
4,493,518	-		Pf6N2E2_3861	0.21	-0.8
4,493,522	-		Pf6N2E2_3861	0.22	-0.3
4,493,535	+		Pf6N2E2_3861	0.23	+0.9
4,493,535	+		Pf6N2E2_3861	0.23	+1.2
4,493,536	-		Pf6N2E2_3861	0.23	-0.6
4,493,536	-		Pf6N2E2_3861	0.23	-0.3
4,493,536	-		Pf6N2E2_3861	0.23	-1.6
4,493,585	+		Pf6N2E2_3861	0.28	+1.6
4,493,596	-		Pf6N2E2_3861	0.29	+0.4
4,493,607	+		Pf6N2E2_3861	0.30	+1.2
4,493,607	+		Pf6N2E2_3861	0.30	+1.6
4,493,607	+		Pf6N2E2_3861	0.30	-0.7
4,493,607	+		Pf6N2E2_3861	0.30	+1.9
4,493,607	+		Pf6N2E2_3861	0.30	+0.7
4,493,607	+		Pf6N2E2_3861	0.30	+0.6
4,493,607	+		Pf6N2E2_3861	0.30	-0.0
4,493,607	+		Pf6N2E2_3861	0.30	+1.5
4,493,607	+		Pf6N2E2_3861	0.30	+0.4
4,493,607	+		Pf6N2E2_3861	0.30	+0.3
4,493,607	+		Pf6N2E2_3861	0.30	+1.6
4,493,607	+		Pf6N2E2_3861	0.30	-1.1
4,493,607	+		Pf6N2E2_3861	0.30	+0.2
4,493,607	+		Pf6N2E2_3861	0.30	+0.5
4,493,607	+		Pf6N2E2_3861	0.30	+1.1
4,493,607	+		Pf6N2E2_3861	0.30	+1.9
4,493,608	-		Pf6N2E2_3861	0.30	-1.8
4,493,608	-		Pf6N2E2_3861	0.30	-0.1
4,493,608	-		Pf6N2E2_3861	0.30	+0.8
4,493,608	-		Pf6N2E2_3861	0.30	-0.7
4,493,608	-		Pf6N2E2_3861	0.30	-0.4
4,493,608	-		Pf6N2E2_3861	0.30	-0.2
4,493,608	-		Pf6N2E2_3861	0.30	-0.2
4,493,608	-		Pf6N2E2_3861	0.30	+0.2
4,493,608	-		Pf6N2E2_3861	0.30	-1.2
4,493,608	-		Pf6N2E2_3861	0.30	+0.5
4,493,608	-		Pf6N2E2_3861	0.30	+1.5
4,493,608	-		Pf6N2E2_3861	0.30	+1.6
4,493,620	+		Pf6N2E2_3861	0.32	+0.3
4,493,620	+		Pf6N2E2_3861	0.32	-0.8
4,493,637	-		Pf6N2E2_3861	0.33	+0.2
4,493,665	+		Pf6N2E2_3861	0.36	+1.1
4,493,736	+		Pf6N2E2_3861	0.43	-0.4
4,493,812	+		Pf6N2E2_3861	0.51	+2.1
4,493,813	-		Pf6N2E2_3861	0.51	-1.7
4,493,825	-		Pf6N2E2_3861	0.52	-0.9
4,493,825	-		Pf6N2E2_3861	0.52	-0.7
4,493,825	-		Pf6N2E2_3861	0.52	-0.4
4,493,836	+		Pf6N2E2_3861	0.53	+1.0
4,493,836	+		Pf6N2E2_3861	0.53	-0.5
4,493,836	+		Pf6N2E2_3861	0.53	+0.8
4,493,836	+		Pf6N2E2_3861	0.53	+0.7
4,493,836	+		Pf6N2E2_3861	0.53	-2.2
4,493,836	+		Pf6N2E2_3861	0.53	+1.1
4,493,837	-		Pf6N2E2_3861	0.53	-0.5
4,493,837	-		Pf6N2E2_3861	0.53	+0.2
4,493,837	-		Pf6N2E2_3861	0.53	+0.5
4,493,837	-		Pf6N2E2_3861	0.53	+0.2
4,493,944	-		Pf6N2E2_3861	0.64	-0.5
4,493,975	+		Pf6N2E2_3861	0.67	+0.5
4,493,976	-		Pf6N2E2_3861	0.67	+1.2
4,493,990	+		Pf6N2E2_3861	0.69	-0.0
4,494,038	+		Pf6N2E2_3861	0.74	-0.9
4,494,071	+		Pf6N2E2_3861	0.77	+0.8
4,494,071	+		Pf6N2E2_3861	0.77	-0.8
4,494,072	-		Pf6N2E2_3861	0.77	+0.1
4,494,072	-		Pf6N2E2_3861	0.77	+0.8
4,494,072	-		Pf6N2E2_3861	0.77	+1.5
4,494,075	+		Pf6N2E2_3861	0.77	-0.4
4,494,075	+		Pf6N2E2_3861	0.77	-1.0
4,494,076	-		Pf6N2E2_3861	0.78	+0.2
4,494,076	-		Pf6N2E2_3861	0.78	+0.1
4,494,132	-		Pf6N2E2_3861	0.83	+5.3
4,494,132	-		Pf6N2E2_3861	0.83	+0.5
4,494,132	-		Pf6N2E2_3861	0.83	-0.8
4,494,132	-		Pf6N2E2_3861	0.83	-1.1
4,494,132	-		Pf6N2E2_3861	0.83	+0.5
4,494,133	+		Pf6N2E2_3861	0.83	+0.1
4,494,133	+		Pf6N2E2_3861	0.83	+0.1
4,494,133	+		Pf6N2E2_3861	0.83	+0.4
4,494,133	+		Pf6N2E2_3861	0.83	+0.8
4,494,133	+		Pf6N2E2_3861	0.83	+1.0
4,494,133	+		Pf6N2E2_3861	0.83	+0.8
4,494,133	+		Pf6N2E2_3861	0.83	+1.9
4,494,133	+		Pf6N2E2_3861	0.83	+0.7
4,494,134	-		Pf6N2E2_3861	0.83	-0.2
4,494,134	-		Pf6N2E2_3861	0.83	-0.8
4,494,134	-		Pf6N2E2_3861	0.83	+0.7
4,494,134	-		Pf6N2E2_3861	0.83	-0.8
4,494,134	-		Pf6N2E2_3861	0.83	-2.4
4,494,134	-		Pf6N2E2_3861	0.83	-0.1
4,494,141	-		Pf6N2E2_3861	0.84	+0.8
4,494,141	-		Pf6N2E2_3861	0.84	+0.5
4,494,141	-		Pf6N2E2_3861	0.84	+0.6
4,494,157	+		Pf6N2E2_3861	0.86	+0.6
4,494,158	-		Pf6N2E2_3861	0.86	-0.2
4,494,162	-		Pf6N2E2_3861	0.86	-1.9
4,494,162	-		Pf6N2E2_3861	0.86	-0.6
4,494,235	+				+0.8
4,494,236	-				+0.5
4,494,236	-				+0.8
4,494,291	-				+1.6
4,494,291	-				+1.4
4,494,296	-				-0.6
4,494,322	-				+0.2
4,494,322	-				+0.8
4,494,397	-				-0.7
4,494,397	-				-0.0
4,494,527	+				-0.8
4,494,528	-				+0.7
4,494,528	-				+0.4
4,494,528	-				-0.4
4,494,592	+				+0.7
4,494,592	+				-0.5
4,494,593	-				-1.7
4,494,593	-				+0.5
4,494,593	-				-1.8
4,494,618	+				-0.6
4,494,618	+				-1.0
4,494,618	+				+0.9
4,494,618	+				-1.2
4,494,618	+				-1.2
4,494,618	+				-0.8
4,494,619	-				-0.2
4,494,619	-				+2.3
4,494,619	-				-0.6
4,494,619	-				-0.1
4,494,719	+				+1.4
4,494,751	+				-0.1
4,494,751	+				-0.2
4,494,751	+				+0.1
4,494,752	-				+0.8
4,494,752	-				-0.9
4,494,752	-				-1.5
4,494,752	-				-2.1
4,494,792	+				-0.5
4,494,792	+				-1.1
4,494,792	+				-0.5
4,494,793	-				-1.1
4,494,793	-				+0.3
4,494,793	-				+0.9
4,494,794	+				+0.4
4,494,794	+				+2.3
4,494,794	+				+0.9
4,494,794	+				-1.0
4,494,794	+				+2.0
4,494,794	+				+1.4
4,494,795	-				+0.1
4,494,795	-				+0.2
4,494,795	-				+0.4
4,494,795	-				+1.0
4,494,795	-				-0.5
4,494,795	-				+0.2
4,494,795	-				+0.5
4,494,825	+				-0.6
4,494,833	+				+0.8
4,494,833	+				+0.8
4,494,834	-				-0.7
4,494,834	-				-0.6
4,494,867	-				-0.6
4,494,867	-				-0.1
4,494,969	-		Pf6N2E2_3862	0.15	-0.2
4,494,979	-		Pf6N2E2_3862	0.20	-0.1
4,495,028	-		Pf6N2E2_3862	0.43	-1.2
4,495,028	-		Pf6N2E2_3862	0.43	+0.8
4,495,028	-		Pf6N2E2_3862	0.43	+0.3
4,495,043	+		Pf6N2E2_3862	0.50	-0.2
4,495,043	+		Pf6N2E2_3862	0.50	+0.5
4,495,044	-		Pf6N2E2_3862	0.51	+0.1
4,495,085	+		Pf6N2E2_3862	0.70	+0.5
4,495,086	-		Pf6N2E2_3862	0.71	-1.0
4,495,086	-		Pf6N2E2_3862	0.71	-0.4
4,495,086	-		Pf6N2E2_3862	0.71	-1.7
4,495,090	-		Pf6N2E2_3862	0.73	-1.0
4,495,090	-		Pf6N2E2_3862	0.73	-0.2
4,495,172	+				-0.0
4,495,172	+				+0.5
4,495,173	-				+1.3
4,495,173	-				-1.0
4,495,183	+				+0.2
4,495,184	-				+1.8
4,495,184	-				-2.0