Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2437

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,883,399	-				-1.0
2,883,403	-				-1.4
2,883,407	-				-0.5
2,883,407	-				-1.2
2,883,412	-				+0.4
2,883,412	-				+0.2
2,883,412	-				-1.0
2,883,412	-				+1.6
2,883,412	-				-0.7
2,883,412	-				+0.6
2,883,419	-				+0.3
2,883,479	-				-0.3
2,883,531	-				+1.2
2,883,543	-				-0.4
2,883,553	-				-0.8
2,883,636	-				-1.5
2,883,671	+				-0.2
2,883,752	-		Pf6N2E2_2436	0.12	+1.5
2,883,753	+		Pf6N2E2_2436	0.12	-1.6
2,883,753	+		Pf6N2E2_2436	0.12	-2.1
2,883,753	+		Pf6N2E2_2436	0.12	+0.3
2,883,754	-		Pf6N2E2_2436	0.12	-0.3
2,883,754	-		Pf6N2E2_2436	0.12	+0.7
2,883,973	+		Pf6N2E2_2436	0.47	-0.4
2,884,038	+		Pf6N2E2_2436	0.58	-0.1
2,884,039	-		Pf6N2E2_2436	0.58	-0.3
2,884,042	+		Pf6N2E2_2436	0.58	+1.4
2,884,043	-		Pf6N2E2_2436	0.59	+0.6
2,884,043	-		Pf6N2E2_2436	0.59	+0.6
2,884,164	+		Pf6N2E2_2436	0.78	-2.5
2,884,203	+		Pf6N2E2_2436	0.84	+0.4
2,884,204	-		Pf6N2E2_2436	0.84	+0.5
2,884,216	-		Pf6N2E2_2436	0.86	+0.4
2,884,220	-		Pf6N2E2_2436	0.87	+1.1
2,884,361	+				-0.5
2,884,361	+				+1.1
2,884,403	+				-1.0
2,884,403	+				+1.3
2,884,403	+				-0.3
2,884,403	+				+2.2
2,884,404	-				+0.5
2,884,405	+				+0.3
2,884,405	+				+0.1
2,884,405	+				+1.2
2,884,405	+				+0.3
2,884,406	-				-0.4
2,884,473	+				+1.4
2,884,518	-				+0.4
2,884,553	+				-1.4
2,884,611	+				+0.1
2,884,827	-		Pf6N2E2_2437	0.13	-1.3
2,884,827	-		Pf6N2E2_2437	0.13	-0.6
2,884,827	-		Pf6N2E2_2437	0.13	+1.7
2,884,832	+		Pf6N2E2_2437	0.13	+1.0
2,884,833	-		Pf6N2E2_2437	0.13	-0.3
2,884,833	-		Pf6N2E2_2437	0.13	-0.3
2,884,879	+		Pf6N2E2_2437	0.14	+0.6
2,884,880	-		Pf6N2E2_2437	0.14	+0.5
2,884,887	-		Pf6N2E2_2437	0.15	+0.4
2,884,896	-		Pf6N2E2_2437	0.15	+1.3
2,884,938	+		Pf6N2E2_2437	0.16	+0.5
2,884,938	+		Pf6N2E2_2437	0.16	+1.1
2,884,939	-		Pf6N2E2_2437	0.16	+1.2
2,884,939	-		Pf6N2E2_2437	0.16	+1.1
2,884,939	-		Pf6N2E2_2437	0.16	+0.2
2,884,967	+		Pf6N2E2_2437	0.17	+0.6
2,884,967	+		Pf6N2E2_2437	0.17	+1.9
2,884,967	+		Pf6N2E2_2437	0.17	-0.1
2,884,967	+		Pf6N2E2_2437	0.17	+1.0
2,884,968	-		Pf6N2E2_2437	0.17	+0.0
2,884,968	-		Pf6N2E2_2437	0.17	+0.8
2,884,968	-		Pf6N2E2_2437	0.17	+1.4
2,884,968	-		Pf6N2E2_2437	0.17	+1.7
2,884,968	-		Pf6N2E2_2437	0.17	+0.7
2,884,968	-		Pf6N2E2_2437	0.17	+0.3
2,884,968	-		Pf6N2E2_2437	0.17	+0.9
2,884,985	+		Pf6N2E2_2437	0.17	+0.8
2,884,985	+		Pf6N2E2_2437	0.17	+1.7
2,884,985	+		Pf6N2E2_2437	0.17	-2.4
2,884,985	+		Pf6N2E2_2437	0.17	+0.3
2,885,090	-		Pf6N2E2_2437	0.20	+0.2
2,885,159	+		Pf6N2E2_2437	0.22	-0.2
2,885,159	+		Pf6N2E2_2437	0.22	+0.8
2,885,160	-		Pf6N2E2_2437	0.22	+0.7
2,885,179	-		Pf6N2E2_2437	0.23	-1.7
2,885,535	+		Pf6N2E2_2437	0.33	+2.5
2,885,535	+		Pf6N2E2_2437	0.33	+0.3
2,885,536	-		Pf6N2E2_2437	0.33	-1.5
2,885,703	-		Pf6N2E2_2437	0.37	+0.2
2,885,703	-		Pf6N2E2_2437	0.37	+0.4
2,885,703	-		Pf6N2E2_2437	0.37	+1.4
2,885,703	-		Pf6N2E2_2437	0.37	-0.5
2,885,703	-		Pf6N2E2_2437	0.37	-0.8
2,885,703	-		Pf6N2E2_2437	0.37	+1.2
2,885,703	-		Pf6N2E2_2437	0.37	-1.2
2,885,703	-		Pf6N2E2_2437	0.37	-0.3
2,885,717	+		Pf6N2E2_2437	0.38	+0.7
2,885,717	+		Pf6N2E2_2437	0.38	+0.8
2,885,718	-		Pf6N2E2_2437	0.38	+0.0
2,885,718	-		Pf6N2E2_2437	0.38	+0.4
2,885,718	-		Pf6N2E2_2437	0.38	+0.5
2,885,919	-		Pf6N2E2_2437	0.43	-1.3
2,885,919	-		Pf6N2E2_2437	0.43	-0.9
2,885,919	-		Pf6N2E2_2437	0.43	-0.4
2,885,919	-		Pf6N2E2_2437	0.43	+2.5
2,885,919	-		Pf6N2E2_2437	0.43	+0.6
2,885,919	-		Pf6N2E2_2437	0.43	+0.2
2,885,919	-		Pf6N2E2_2437	0.43	+0.3
2,885,964	+		Pf6N2E2_2437	0.45	+1.9
2,885,964	+		Pf6N2E2_2437	0.45	+0.6
2,885,965	-		Pf6N2E2_2437	0.45	-0.8
2,885,990	+		Pf6N2E2_2437	0.45	+2.0
2,885,990	+		Pf6N2E2_2437	0.45	+1.5
2,885,991	-		Pf6N2E2_2437	0.45	+0.3
2,886,092	+		Pf6N2E2_2437	0.48	+1.1
2,886,092	+		Pf6N2E2_2437	0.48	-0.3
2,886,092	+		Pf6N2E2_2437	0.48	+1.4
2,886,092	+		Pf6N2E2_2437	0.48	-0.8
2,886,092	+		Pf6N2E2_2437	0.48	+1.0
2,886,092	+		Pf6N2E2_2437	0.48	+0.5
2,886,092	+		Pf6N2E2_2437	0.48	-2.5
2,886,092	+		Pf6N2E2_2437	0.48	+0.5
2,886,093	-		Pf6N2E2_2437	0.48	-1.1
2,886,093	-		Pf6N2E2_2437	0.48	+1.7
2,886,093	-		Pf6N2E2_2437	0.48	-1.3
2,886,093	-		Pf6N2E2_2437	0.48	+0.5
2,886,093	-		Pf6N2E2_2437	0.48	+1.0
2,886,093	-		Pf6N2E2_2437	0.48	+2.1
2,886,093	-		Pf6N2E2_2437	0.48	-1.7
2,886,093	-		Pf6N2E2_2437	0.48	-2.7
2,886,093	-		Pf6N2E2_2437	0.48	+0.7
2,886,137	+		Pf6N2E2_2437	0.50	+1.3
2,886,137	+		Pf6N2E2_2437	0.50	-1.6
2,886,137	+		Pf6N2E2_2437	0.50	+0.2
2,886,138	-		Pf6N2E2_2437	0.50	-1.0
2,886,138	-		Pf6N2E2_2437	0.50	+1.3
2,886,138	-		Pf6N2E2_2437	0.50	-0.8
2,886,227	+		Pf6N2E2_2437	0.52	+1.7
2,886,240	-		Pf6N2E2_2437	0.52	-0.2
2,886,317	+		Pf6N2E2_2437	0.55	-0.0
2,886,318	-		Pf6N2E2_2437	0.55	+1.7
2,886,318	-		Pf6N2E2_2437	0.55	+0.2
2,886,318	-		Pf6N2E2_2437	0.55	+1.1
2,886,318	-		Pf6N2E2_2437	0.55	-0.7
2,886,561	+		Pf6N2E2_2437	0.61	-0.2
2,886,561	+		Pf6N2E2_2437	0.61	-1.7
2,886,561	+		Pf6N2E2_2437	0.61	+1.8
2,886,561	+		Pf6N2E2_2437	0.61	+0.4
2,886,562	-		Pf6N2E2_2437	0.62	+1.5
2,886,562	-		Pf6N2E2_2437	0.62	+0.2
2,886,626	-		Pf6N2E2_2437	0.63	+2.4
2,886,626	-		Pf6N2E2_2437	0.63	-1.8
2,886,873	+		Pf6N2E2_2437	0.70	+0.5
2,886,873	+		Pf6N2E2_2437	0.70	-0.2
2,886,874	-		Pf6N2E2_2437	0.70	+0.5
2,886,874	-		Pf6N2E2_2437	0.70	+1.6
2,886,955	+		Pf6N2E2_2437	0.73	+0.1
2,887,061	-		Pf6N2E2_2437	0.76	-1.6
2,887,061	-		Pf6N2E2_2437	0.76	+0.6
2,887,275	-		Pf6N2E2_2437	0.82	-1.5
2,887,290	-		Pf6N2E2_2437	0.82	-1.3
2,887,602	+				+0.6
2,887,602	+				+0.7
2,887,602	+				+1.2
2,887,603	-				-1.0
2,887,603	-				+0.2
2,887,603	-				+0.4
2,887,603	-				-1.5
2,887,744	-				+0.6
2,887,755	+				+0.4
2,887,755	+				+2.3
2,887,755	+				+2.2
2,887,756	-				+1.6
2,887,756	-				-0.0
2,887,756	-				-0.4
2,887,943	+				+3.6
2,887,946	+				+2.3
2,887,946	+				+2.7
2,887,947	-				+0.5
2,887,947	-				-0.8
2,887,947	-				-0.7
2,887,947	-				-0.2
2,887,947	-				+0.2
2,887,947	-				+0.3
2,887,947	-				+0.4
2,887,947	-				+0.6
2,887,947	-				+0.9
2,887,951	+				+3.1
2,887,951	+				+3.6
2,887,952	-				-2.0
2,887,952	-				+1.1
2,887,952	-				-1.8
2,887,952	-				+0.8
2,887,969	+		Pf6N2E2_2438	0.16	+8.2
2,887,969	+		Pf6N2E2_2438	0.16	+4.7
2,888,112	+				-0.1
2,888,113	-				-1.6
2,888,211	+				+0.5
2,888,240	-				+1.5
2,888,240	-				-0.5
2,888,240	-				+1.0
2,888,248	+				-1.5
2,888,248	+				+1.5
2,888,248	+				+0.0
2,888,248	+				+0.0
2,888,249	-				-0.3
2,888,249	-				-0.2
2,888,249	-				+1.0
2,888,249	-				-0.5
2,888,383	+		Pf6N2E2_2439	0.11	-0.5
2,888,384	-		Pf6N2E2_2439	0.11	+0.3
2,888,384	-		Pf6N2E2_2439	0.11	-0.5
2,888,476	+		Pf6N2E2_2439	0.15	-1.4
2,888,477	-		Pf6N2E2_2439	0.15	+1.1
2,888,590	+		Pf6N2E2_2439	0.18	+0.2
2,888,590	+		Pf6N2E2_2439	0.18	+1.4
2,888,591	-		Pf6N2E2_2439	0.18	-0.8
2,888,591	-		Pf6N2E2_2439	0.18	+0.0
2,888,591	-		Pf6N2E2_2439	0.18	-0.1
2,888,591	-		Pf6N2E2_2439	0.18	-1.7