Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22570

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
5,080,855	+		PFLU_RS22565	0.51	-1.7
5,080,855	+		PFLU_RS22565	0.51	+0.9
5,080,855	+		PFLU_RS22565	0.51	+0.1
5,080,855	+		PFLU_RS22565	0.51	+2.1
5,080,856	-		PFLU_RS22565	0.52	-2.4
5,080,856	-		PFLU_RS22565	0.52	-0.3
5,080,856	-		PFLU_RS22565	0.52	+0.5
5,080,856	-		PFLU_RS22565	0.52	-0.4
5,080,988	+		PFLU_RS22565	0.61	+0.5
5,080,989	-		PFLU_RS22565	0.61	+0.9
5,080,989	-		PFLU_RS22565	0.61	+0.5
5,081,010	+		PFLU_RS22565	0.62	+1.5
5,081,108	+		PFLU_RS22565	0.69	-0.5
5,081,108	+		PFLU_RS22565	0.69	+0.2
5,081,108	+		PFLU_RS22565	0.69	-0.1
5,081,108	+		PFLU_RS22565	0.69	+1.4
5,081,108	+		PFLU_RS22565	0.69	+1.5
5,081,108	+		PFLU_RS22565	0.69	-0.3
5,081,108	+		PFLU_RS22565	0.69	+0.7
5,081,108	+		PFLU_RS22565	0.69	-1.9
5,081,108	+		PFLU_RS22565	0.69	+1.0
5,081,108	+		PFLU_RS22565	0.69	+0.8
5,081,108	+		PFLU_RS22565	0.69	-1.3
5,081,108	+		PFLU_RS22565	0.69	+0.1
5,081,108	+		PFLU_RS22565	0.69	+0.7
5,081,108	+		PFLU_RS22565	0.69	+0.5
5,081,109	-		PFLU_RS22565	0.69	+1.7
5,081,109	-		PFLU_RS22565	0.69	-0.6
5,081,109	-		PFLU_RS22565	0.69	+0.2
5,081,109	-		PFLU_RS22565	0.69	-1.0
5,081,109	-		PFLU_RS22565	0.69	+0.1
5,081,109	-		PFLU_RS22565	0.69	-2.0
5,081,109	-		PFLU_RS22565	0.69	-0.5
5,081,109	-		PFLU_RS22565	0.69	-0.0
5,081,109	-		PFLU_RS22565	0.69	+0.6
5,081,109	-		PFLU_RS22565	0.69	-2.0
5,081,109	-		PFLU_RS22565	0.69	-0.4
5,081,109	-		PFLU_RS22565	0.69	+0.9
5,081,129	+		PFLU_RS22565	0.70	-1.4
5,081,129	+		PFLU_RS22565	0.70	+0.6
5,081,129	+		PFLU_RS22565	0.70	-2.5
5,081,129	+		PFLU_RS22565	0.70	-2.6
5,081,129	+		PFLU_RS22565	0.70	-0.8
5,081,130	-		PFLU_RS22565	0.70	+1.3
5,081,130	-		PFLU_RS22565	0.70	-0.8
5,081,130	-		PFLU_RS22565	0.70	+0.4
5,081,130	-		PFLU_RS22565	0.70	+0.3
5,081,130	-		PFLU_RS22565	0.70	+0.8
5,081,130	-		PFLU_RS22565	0.70	-1.3
5,081,130	-		PFLU_RS22565	0.70	+1.6
5,081,130	-		PFLU_RS22565	0.70	-0.5
5,081,130	-		PFLU_RS22565	0.70	-0.6
5,081,130	-		PFLU_RS22565	0.70	+1.0
5,081,199	+		PFLU_RS22565	0.75	-0.2
5,081,199	+		PFLU_RS22565	0.75	+1.5
5,081,199	+		PFLU_RS22565	0.75	+0.9
5,081,220	+		PFLU_RS22565	0.77	+1.3
5,081,221	-		PFLU_RS22565	0.77	-0.1
5,081,221	-		PFLU_RS22565	0.77	+0.7
5,081,221	-		PFLU_RS22565	0.77	+0.5
5,081,264	+		PFLU_RS22565	0.80	-0.5
5,081,264	+		PFLU_RS22565	0.80	+1.7
5,081,264	+		PFLU_RS22565	0.80	-0.4
5,081,264	+		PFLU_RS22565	0.80	-1.8
5,081,264	+		PFLU_RS22565	0.80	+1.6
5,081,265	-		PFLU_RS22565	0.80	-1.1
5,081,265	-		PFLU_RS22565	0.80	-0.0
5,081,265	-		PFLU_RS22565	0.80	-1.5
5,081,265	-		PFLU_RS22565	0.80	-1.1
5,081,265	-		PFLU_RS22565	0.80	+2.1
5,081,265	-		PFLU_RS22565	0.80	+1.5
5,081,265	-		PFLU_RS22565	0.80	-2.7
5,081,270	+		PFLU_RS22565	0.80	+0.9
5,081,270	+		PFLU_RS22565	0.80	-0.1
5,081,270	+		PFLU_RS22565	0.80	-0.4
5,081,270	+		PFLU_RS22565	0.80	-0.1
5,081,270	+		PFLU_RS22565	0.80	+0.9
5,081,270	+		PFLU_RS22565	0.80	-0.5
5,081,270	+		PFLU_RS22565	0.80	+2.2
5,081,270	+		PFLU_RS22565	0.80	-1.7
5,081,270	+		PFLU_RS22565	0.80	-1.8
5,081,270	+		PFLU_RS22565	0.80	+0.9
5,081,270	+		PFLU_RS22565	0.80	+0.7
5,081,270	+		PFLU_RS22565	0.80	+1.1
5,081,270	+		PFLU_RS22565	0.80	-2.4
5,081,270	+		PFLU_RS22565	0.80	+0.2
5,081,270	+		PFLU_RS22565	0.80	+1.3
5,081,270	+		PFLU_RS22565	0.80	-0.5
5,081,270	+		PFLU_RS22565	0.80	+1.5
5,081,270	+		PFLU_RS22565	0.80	+1.8
5,081,270	+		PFLU_RS22565	0.80	-1.2
5,081,271	-		PFLU_RS22565	0.80	+0.7
5,081,271	-		PFLU_RS22565	0.80	+0.8
5,081,271	-		PFLU_RS22565	0.80	+1.0
5,081,271	-		PFLU_RS22565	0.80	-0.1
5,081,271	-		PFLU_RS22565	0.80	+1.3
5,081,271	-		PFLU_RS22565	0.80	-1.1
5,081,271	-		PFLU_RS22565	0.80	+1.3
5,081,271	-		PFLU_RS22565	0.80	-1.8
5,081,271	-		PFLU_RS22565	0.80	+0.2
5,081,271	-		PFLU_RS22565	0.80	+0.4
5,081,271	-		PFLU_RS22565	0.80	-0.3
5,081,271	-		PFLU_RS22565	0.80	+0.3
5,081,271	-		PFLU_RS22565	0.80	+1.3
5,081,271	-		PFLU_RS22565	0.80	+0.5
5,081,271	-		PFLU_RS22565	0.80	+0.5
5,081,271	-		PFLU_RS22565	0.80	-0.6
5,081,271	-		PFLU_RS22565	0.80	+0.9
5,081,271	-		PFLU_RS22565	0.80	+0.7
5,081,271	-		PFLU_RS22565	0.80	+1.3
5,081,271	-		PFLU_RS22565	0.80	-1.4
5,081,271	-		PFLU_RS22565	0.80	+0.1
5,081,292	-		PFLU_RS22565	0.82	+1.3
5,081,439	+				+0.5
5,081,439	+				+1.1
5,081,439	+				+1.2
5,081,439	+				-1.1
5,081,439	+				-2.0
5,081,440	-				+1.0
5,081,466	-				-1.4
5,081,576	+				-0.4
5,081,576	+				+0.8
5,081,576	+				-2.4
5,081,577	-				+0.0
5,081,577	-				+0.8
5,081,622	+				-0.4
5,081,622	+				+0.7
5,081,622	+				+0.7
5,081,623	-				-0.7
5,081,623	-				+1.8
5,081,702	+				-0.7
5,081,702	+				+0.9
5,081,702	+				+0.5
5,081,703	-				+0.0
5,081,703	-				-0.8
5,081,703	-				-0.5
5,081,703	-				-1.6
5,081,703	-				-0.9
5,081,703	-				-0.8
5,081,763	+				+1.0
5,081,777	+				+1.8
5,081,777	+				-0.7
5,081,777	+				-0.8
5,081,777	+				-1.8
5,081,777	+				-0.1
5,081,777	+				+1.3
5,081,777	+				+0.5
5,081,777	+				+1.1
5,081,777	+				-1.7
5,081,777	+				+0.4
5,081,777	+				+0.9
5,081,777	+				+1.5
5,081,777	+				+1.7
5,081,778	-				-1.5
5,081,778	-				-2.9
5,081,778	-				+0.2
5,081,778	-				-2.4
5,081,778	-				-1.5
5,081,778	-				-1.6
5,081,778	-				-0.6
5,081,778	-				-2.0
5,081,778	-				-0.2
5,081,822	+				+0.9
5,081,822	+				-2.9
5,081,822	+				+0.0
5,081,822	+				+0.5
5,081,823	-				-3.3
5,081,823	-				-0.9
5,081,828	+				-2.3
5,081,828	+				+0.8
5,081,828	+				+0.3
5,081,828	+				+0.3
5,081,828	+				-0.8
5,081,828	+				-0.2
5,081,828	+				-2.4
5,081,828	+				-2.4
5,081,828	+				-2.5
5,081,828	+				-0.7
5,081,828	+				-1.7
5,081,828	+				-2.5
5,081,828	+				-2.5
5,081,828	+				-2.3
5,081,828	+				+0.8
5,081,828	+				-2.6
5,081,828	+				+0.0
5,081,828	+				-1.0
5,081,828	+				-2.7
5,081,828	+				-3.6
5,081,828	+				-2.5
5,081,828	+				-0.1
5,081,829	-				+0.2
5,081,829	-				-0.8
5,081,829	-				-2.0
5,081,829	-				-0.8
5,081,829	-				-0.3
5,081,829	-				-1.3
5,081,829	-				-1.7
5,081,829	-				-0.8
5,081,829	-				-0.5
5,081,829	-				-0.8
5,081,829	-				-1.8
5,081,829	-				-0.5
5,081,829	-				-3.2
5,081,829	-				+0.3
5,081,829	-				-2.1
5,081,829	-				-3.3
5,081,829	-				-2.4
5,081,829	-				+0.5
5,082,080	+		PFLU_RS22570	0.20	-1.7
5,082,092	+		PFLU_RS22570	0.21	-0.1
5,082,092	+		PFLU_RS22570	0.21	-0.7
5,082,092	+		PFLU_RS22570	0.21	-2.1
5,082,092	+		PFLU_RS22570	0.21	-1.2
5,082,092	+		PFLU_RS22570	0.21	-0.5
5,082,092	+		PFLU_RS22570	0.21	-2.2
5,082,092	+		PFLU_RS22570	0.21	-2.0
5,082,092	+		PFLU_RS22570	0.21	+1.1
5,082,092	+		PFLU_RS22570	0.21	-0.5
5,082,092	+		PFLU_RS22570	0.21	-1.6
5,082,092	+		PFLU_RS22570	0.21	-0.8
5,082,093	-		PFLU_RS22570	0.21	-0.2
5,082,093	-		PFLU_RS22570	0.21	-2.6
5,082,093	-		PFLU_RS22570	0.21	-1.5
5,082,093	-		PFLU_RS22570	0.21	-1.3
5,082,093	-		PFLU_RS22570	0.21	-2.1
5,082,093	-		PFLU_RS22570	0.21	-1.0
5,082,093	-		PFLU_RS22570	0.21	-2.0
5,082,093	-		PFLU_RS22570	0.21	-2.0
5,082,141	+		PFLU_RS22570	0.25	-0.2
5,082,142	-		PFLU_RS22570	0.25	-2.5
5,082,142	-		PFLU_RS22570	0.25	-3.1
5,082,142	-		PFLU_RS22570	0.25	-2.0
5,082,305	+		PFLU_RS22570	0.39	-1.8
5,082,305	+		PFLU_RS22570	0.39	-1.6
5,082,305	+		PFLU_RS22570	0.39	-2.2
5,082,305	+		PFLU_RS22570	0.39	-2.9
5,082,306	-		PFLU_RS22570	0.39	+0.0
5,082,306	-		PFLU_RS22570	0.39	-2.0
5,082,306	-		PFLU_RS22570	0.39	+0.1
5,082,306	-		PFLU_RS22570	0.39	-2.7
5,082,306	-		PFLU_RS22570	0.39	-0.9
5,082,306	-		PFLU_RS22570	0.39	-1.7
5,082,306	-		PFLU_RS22570	0.39	-1.8
5,082,308	+		PFLU_RS22570	0.39	-1.9
5,082,308	+		PFLU_RS22570	0.39	-1.4
5,082,308	+		PFLU_RS22570	0.39	-2.0
5,082,308	+		PFLU_RS22570	0.39	+1.5
5,082,339	+		PFLU_RS22570	0.41	-1.8
5,082,339	+		PFLU_RS22570	0.41	-0.6
5,082,339	+		PFLU_RS22570	0.41	+0.7
5,082,340	-		PFLU_RS22570	0.41	-0.7
5,082,340	-		PFLU_RS22570	0.41	-2.3
5,082,466	+		PFLU_RS22570	0.52	-2.3
5,082,466	+		PFLU_RS22570	0.52	-2.7
5,082,466	+		PFLU_RS22570	0.52	+0.6
5,082,466	+		PFLU_RS22570	0.52	+0.8
5,082,467	-		PFLU_RS22570	0.52	-1.6
5,082,467	-		PFLU_RS22570	0.52	-1.8
5,082,545	+		PFLU_RS22570	0.58	+1.5
5,082,546	-		PFLU_RS22570	0.58	-0.5
5,082,565	-		PFLU_RS22570	0.60	-1.7
5,082,656	+		PFLU_RS22570	0.67	+2.0
5,082,704	+		PFLU_RS22570	0.71	-0.4
5,082,704	+		PFLU_RS22570	0.71	-2.2
5,082,704	+		PFLU_RS22570	0.71	+1.1
5,082,704	+		PFLU_RS22570	0.71	+1.7
5,082,704	+		PFLU_RS22570	0.71	-1.2
5,082,782	+		PFLU_RS22570	0.78	-2.2
5,082,782	+		PFLU_RS22570	0.78	+0.7
5,082,782	+		PFLU_RS22570	0.78	-0.8
5,082,782	+		PFLU_RS22570	0.78	-2.3
5,082,782	+		PFLU_RS22570	0.78	+0.3
5,082,783	-		PFLU_RS22570	0.78	-1.7
5,082,851	+		PFLU_RS22570	0.83	-0.3
5,082,851	+		PFLU_RS22570	0.83	-0.9
5,082,851	+		PFLU_RS22570	0.83	+0.9
5,082,852	-		PFLU_RS22570	0.83	-2.0
5,082,852	-		PFLU_RS22570	0.83	-2.2
5,082,995	+				+0.2
5,082,995	+				-1.9
5,082,995	+				+0.6
5,082,995	+				-2.6
5,082,996	-				-1.7
5,082,996	-				-2.2
5,083,088	-				+0.5
5,083,088	-				-0.6
5,083,088	-				-2.7
5,083,308	-		PFLU_RS22575	0.41	-3.7
5,083,365	+		PFLU_RS22575	0.51	-3.0
5,083,365	+		PFLU_RS22575	0.51	-0.1
5,083,365	+		PFLU_RS22575	0.51	-3.7
5,083,365	+		PFLU_RS22575	0.51	-2.3
5,083,365	+		PFLU_RS22575	0.51	-1.1
5,083,365	+		PFLU_RS22575	0.51	-1.1
5,083,366	-		PFLU_RS22575	0.51	-2.0
5,083,366	-		PFLU_RS22575	0.51	+1.7
5,083,379	+		PFLU_RS22575	0.53	-0.1
5,083,379	+		PFLU_RS22575	0.53	-2.7
5,083,380	-		PFLU_RS22575	0.54	-1.0
5,083,554	+		PFLU_RS22575	0.84	+0.2
5,083,554	+		PFLU_RS22575	0.84	-0.8
5,083,554	+		PFLU_RS22575	0.84	-1.3
5,083,554	+		PFLU_RS22575	0.84	-0.6
5,083,555	-		PFLU_RS22575	0.84	-1.3
5,083,555	-		PFLU_RS22575	0.84	-1.3
5,083,555	-		PFLU_RS22575	0.84	-1.5
5,083,555	-		PFLU_RS22575	0.84	-2.3
5,083,555	-		PFLU_RS22575	0.84	-2.0
5,083,555	-		PFLU_RS22575	0.84	+0.5
5,083,555	-		PFLU_RS22575	0.84	-0.5
5,083,555	-		PFLU_RS22575	0.84	-1.5
5,083,555	-		PFLU_RS22575	0.84	-0.2
5,083,606	+				-3.0
5,083,664	+				-0.9
5,083,664	+				+0.7
5,083,665	-				-1.1
5,083,665	-				-3.7
5,083,665	-				-1.1
5,083,665	-				-0.0
5,083,665	-				-1.7
5,083,668	+				+0.1
5,083,668	+				+0.3
5,083,668	+				+0.3
5,083,668	+				+0.9
5,083,669	-				-1.7
5,083,669	-				-1.3
5,083,669	-				-2.4
5,083,669	-				-0.9
5,083,681	+				-0.5
5,083,682	-				-1.0
5,083,682	-				-2.5
5,083,827	+				-0.4
5,083,827	+				-3.3
5,083,827	+				-0.4
5,083,827	+				+2.5
5,083,827	+				-2.4
5,083,827	+				+3.1
5,083,827	+				-0.6
5,083,828	-				+0.1
5,083,828	-				-0.1
5,083,828	-				-1.1
5,083,828	-				+1.9
5,083,828	-				-1.3
5,083,828	-				-1.0
5,083,828	-				-1.8
5,083,828	-				-0.2
5,083,828	-				-1.3
5,083,828	-				-2.5
5,083,828	-				-0.1
5,083,828	-				-1.2
5,083,828	-				-1.1
5,083,828	-				-0.3
5,083,828	-				-1.2
5,083,913	+				-0.9
5,083,914	-				-3.9
5,083,914	-				-3.2
5,083,914	-				-2.1
5,083,940	+				-2.5
5,083,941	-				-0.7
5,083,941	-				-2.0
5,083,941	-				-0.5