Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3139 and Ga0059261_3140 are separated by 104 nucleotides Ga0059261_3140 and Ga0059261_3141 overlap by 11 nucleotides Ga0059261_3141 and Ga0059261_3142 overlap by 4 nucleotides Ga0059261_3142 and Ga0059261_3143 are separated by 7 nucleotides
Ga0059261_3139: Ga0059261_3139 - Predicted membrane protein, at 3,282,253 to 3,282,912
_3139
Ga0059261_3140: Ga0059261_3140 - Regulator of competence-specific genes, at 3,283,017 to 3,283,370
_3140
Ga0059261_3141: Ga0059261_3141 - Acetyltransferases, at 3,283,360 to 3,283,839
_3141
Ga0059261_3142: Ga0059261_3142 - Predicted permeases, at 3,283,836 to 3,284,774
_3142
Ga0059261_3143: Ga0059261_3143 - Zn-dependent hydrolases, including glyoxylases, at 3,284,782 to 3,285,690
_3143
Position (kb)
3283
3284 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3282.655 kb on + strand, within Ga0059261_3139 at 3282.655 kb on + strand, within Ga0059261_3139 at 3282.655 kb on + strand, within Ga0059261_3139 at 3282.655 kb on + strand, within Ga0059261_3139 at 3282.656 kb on - strand, within Ga0059261_3139 at 3282.656 kb on - strand, within Ga0059261_3139 at 3282.656 kb on - strand, within Ga0059261_3139 at 3282.667 kb on + strand, within Ga0059261_3139 at 3282.667 kb on + strand, within Ga0059261_3139 at 3282.682 kb on + strand, within Ga0059261_3139 at 3282.683 kb on - strand, within Ga0059261_3139 at 3282.683 kb on - strand, within Ga0059261_3139 at 3282.683 kb on - strand, within Ga0059261_3139 at 3282.746 kb on - strand, within Ga0059261_3139 at 3282.769 kb on + strand, within Ga0059261_3139 at 3282.770 kb on - strand, within Ga0059261_3139 at 3282.770 kb on - strand, within Ga0059261_3139 at 3282.911 kb on - strand at 3282.975 kb on + strand at 3282.976 kb on - strand at 3282.976 kb on - strand at 3283.112 kb on - strand, within Ga0059261_3140 at 3283.129 kb on + strand, within Ga0059261_3140 at 3283.129 kb on + strand, within Ga0059261_3140 at 3283.129 kb on + strand, within Ga0059261_3140 at 3283.129 kb on + strand, within Ga0059261_3140 at 3283.130 kb on - strand, within Ga0059261_3140 at 3283.130 kb on - strand, within Ga0059261_3140 at 3283.273 kb on + strand, within Ga0059261_3140 at 3283.273 kb on + strand, within Ga0059261_3140 at 3283.273 kb on + strand, within Ga0059261_3140 at 3283.273 kb on + strand, within Ga0059261_3140 at 3283.274 kb on - strand, within Ga0059261_3140 at 3283.449 kb on - strand, within Ga0059261_3141 at 3283.449 kb on - strand, within Ga0059261_3141 at 3283.766 kb on + strand, within Ga0059261_3141 at 3283.767 kb on - strand, within Ga0059261_3141 at 3283.767 kb on - strand, within Ga0059261_3141 at 3283.944 kb on + strand, within Ga0059261_3142 at 3283.945 kb on - strand, within Ga0059261_3142 at 3283.945 kb on - strand, within Ga0059261_3142 at 3283.998 kb on - strand, within Ga0059261_3142 at 3283.998 kb on - strand, within Ga0059261_3142 at 3283.999 kb on + strand, within Ga0059261_3142 at 3283.999 kb on + strand, within Ga0059261_3142 at 3283.999 kb on + strand, within Ga0059261_3142 at 3283.999 kb on + strand, within Ga0059261_3142 at 3284.000 kb on - strand, within Ga0059261_3142 at 3284.001 kb on + strand, within Ga0059261_3142 at 3284.017 kb on + strand, within Ga0059261_3142 at 3284.017 kb on + strand, within Ga0059261_3142 at 3284.017 kb on + strand, within Ga0059261_3142 at 3284.017 kb on + strand, within Ga0059261_3142 at 3284.018 kb on - strand, within Ga0059261_3142 at 3284.018 kb on - strand, within Ga0059261_3142 at 3284.018 kb on - strand, within Ga0059261_3142 at 3284.018 kb on - strand, within Ga0059261_3142 at 3284.018 kb on - strand, within Ga0059261_3142 at 3284.018 kb on - strand, within Ga0059261_3142 at 3284.038 kb on + strand, within Ga0059261_3142 at 3284.038 kb on + strand, within Ga0059261_3142 at 3284.039 kb on - strand, within Ga0059261_3142 at 3284.149 kb on + strand, within Ga0059261_3142 at 3284.149 kb on + strand, within Ga0059261_3142 at 3284.149 kb on + strand, within Ga0059261_3142 at 3284.149 kb on + strand, within Ga0059261_3142 at 3284.150 kb on - strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.242 kb on + strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.243 kb on - strand, within Ga0059261_3142 at 3284.378 kb on + strand, within Ga0059261_3142 at 3284.378 kb on + strand, within Ga0059261_3142 at 3284.378 kb on + strand, within Ga0059261_3142 at 3284.378 kb on + strand, within Ga0059261_3142 at 3284.379 kb on - strand, within Ga0059261_3142 at 3284.379 kb on - strand, within Ga0059261_3142 at 3284.379 kb on - strand, within Ga0059261_3142 at 3284.379 kb on - strand, within Ga0059261_3142 at 3284.520 kb on + strand, within Ga0059261_3142 at 3284.573 kb on - strand, within Ga0059261_3142 at 3284.573 kb on - strand at 3284.624 kb on + strand, within Ga0059261_3142 at 3284.624 kb on + strand, within Ga0059261_3142 at 3284.625 kb on - strand, within Ga0059261_3142 at 3284.625 kb on - strand, within Ga0059261_3142 at 3284.625 kb on - strand, within Ga0059261_3142 at 3284.625 kb on - strand, within Ga0059261_3142 at 3284.626 kb on + strand, within Ga0059261_3142 at 3284.626 kb on + strand, within Ga0059261_3142 at 3284.626 kb on + strand, within Ga0059261_3142 at 3284.626 kb on + strand, within Ga0059261_3142 at 3284.626 kb on + strand, within Ga0059261_3142 at 3284.627 kb on - strand, within Ga0059261_3142 at 3284.627 kb on - strand, within Ga0059261_3142 at 3284.627 kb on - strand, within Ga0059261_3142 at 3284.834 kb on + strand at 3284.834 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 3,282,655 + Ga0059261_3139 0.61 +0.8 3,282,655 + Ga0059261_3139 0.61 -0.9 3,282,655 + Ga0059261_3139 0.61 -0.7 3,282,655 + Ga0059261_3139 0.61 +0.3 3,282,656 - Ga0059261_3139 0.61 -1.7 3,282,656 - Ga0059261_3139 0.61 -0.6 3,282,656 - Ga0059261_3139 0.61 -0.3 3,282,667 + Ga0059261_3139 0.63 -0.4 3,282,667 + Ga0059261_3139 0.63 +1.1 3,282,682 + Ga0059261_3139 0.65 +0.7 3,282,683 - Ga0059261_3139 0.65 +0.1 3,282,683 - Ga0059261_3139 0.65 +0.7 3,282,683 - Ga0059261_3139 0.65 +1.1 3,282,746 - Ga0059261_3139 0.75 -0.2 3,282,769 + Ga0059261_3139 0.78 +0.3 3,282,770 - Ga0059261_3139 0.78 -0.1 3,282,770 - Ga0059261_3139 0.78 -0.5 3,282,911 - +0.3 3,282,975 + -0.2 3,282,976 - +0.0 3,282,976 - +0.1 3,283,112 - Ga0059261_3140 0.27 +0.1 3,283,129 + Ga0059261_3140 0.32 +1.8 3,283,129 + Ga0059261_3140 0.32 -0.5 3,283,129 + Ga0059261_3140 0.32 +0.3 3,283,129 + Ga0059261_3140 0.32 -0.1 3,283,130 - Ga0059261_3140 0.32 -0.9 3,283,130 - Ga0059261_3140 0.32 +0.4 3,283,273 + Ga0059261_3140 0.72 +0.4 3,283,273 + Ga0059261_3140 0.72 -0.4 3,283,273 + Ga0059261_3140 0.72 +0.6 3,283,273 + Ga0059261_3140 0.72 -1.8 3,283,274 - Ga0059261_3140 0.73 -1.2 3,283,449 - Ga0059261_3141 0.19 -0.5 3,283,449 - Ga0059261_3141 0.19 -0.4 3,283,766 + Ga0059261_3141 0.85 -0.4 3,283,767 - Ga0059261_3141 0.85 +0.5 3,283,767 - Ga0059261_3141 0.85 -0.5 3,283,944 + Ga0059261_3142 0.12 +0.9 3,283,945 - Ga0059261_3142 0.12 -0.4 3,283,945 - Ga0059261_3142 0.12 +1.1 3,283,998 - Ga0059261_3142 0.17 +0.4 3,283,998 - Ga0059261_3142 0.17 -0.3 3,283,999 + Ga0059261_3142 0.17 -0.2 3,283,999 + Ga0059261_3142 0.17 +0.2 3,283,999 + Ga0059261_3142 0.17 -0.2 3,283,999 + Ga0059261_3142 0.17 -0.2 3,284,000 - Ga0059261_3142 0.17 +0.2 3,284,001 + Ga0059261_3142 0.18 +0.1 3,284,017 + Ga0059261_3142 0.19 +0.3 3,284,017 + Ga0059261_3142 0.19 -0.9 3,284,017 + Ga0059261_3142 0.19 -0.1 3,284,017 + Ga0059261_3142 0.19 -0.2 3,284,018 - Ga0059261_3142 0.19 -0.3 3,284,018 - Ga0059261_3142 0.19 -0.2 3,284,018 - Ga0059261_3142 0.19 -1.2 3,284,018 - Ga0059261_3142 0.19 -0.7 3,284,018 - Ga0059261_3142 0.19 +0.4 3,284,018 - Ga0059261_3142 0.19 -0.3 3,284,038 + Ga0059261_3142 0.22 +0.7 3,284,038 + Ga0059261_3142 0.22 +0.1 3,284,039 - Ga0059261_3142 0.22 -0.0 3,284,149 + Ga0059261_3142 0.33 +0.1 3,284,149 + Ga0059261_3142 0.33 -0.1 3,284,149 + Ga0059261_3142 0.33 +0.8 3,284,149 + Ga0059261_3142 0.33 +0.1 3,284,150 - Ga0059261_3142 0.33 -1.5 3,284,242 + Ga0059261_3142 0.43 -0.6 3,284,242 + Ga0059261_3142 0.43 +0.2 3,284,242 + Ga0059261_3142 0.43 -1.1 3,284,242 + Ga0059261_3142 0.43 +0.4 3,284,242 + Ga0059261_3142 0.43 +0.1 3,284,242 + Ga0059261_3142 0.43 -0.7 3,284,242 + Ga0059261_3142 0.43 -0.8 3,284,243 - Ga0059261_3142 0.43 +0.8 3,284,243 - Ga0059261_3142 0.43 +0.8 3,284,243 - Ga0059261_3142 0.43 -0.4 3,284,243 - Ga0059261_3142 0.43 +0.0 3,284,243 - Ga0059261_3142 0.43 -0.5 3,284,243 - Ga0059261_3142 0.43 +0.4 3,284,243 - Ga0059261_3142 0.43 -0.2 3,284,243 - Ga0059261_3142 0.43 +0.0 3,284,243 - Ga0059261_3142 0.43 -0.2 3,284,243 - Ga0059261_3142 0.43 -0.7 3,284,378 + Ga0059261_3142 0.58 -0.2 3,284,378 + Ga0059261_3142 0.58 -0.8 3,284,378 + Ga0059261_3142 0.58 +0.4 3,284,378 + Ga0059261_3142 0.58 -1.4 3,284,379 - Ga0059261_3142 0.58 +1.5 3,284,379 - Ga0059261_3142 0.58 +0.2 3,284,379 - Ga0059261_3142 0.58 +0.6 3,284,379 - Ga0059261_3142 0.58 -1.1 3,284,520 + Ga0059261_3142 0.73 -0.6 3,284,573 - Ga0059261_3142 0.78 +0.2 3,284,573 - -0.9 3,284,624 + Ga0059261_3142 0.84 +0.0 3,284,624 + Ga0059261_3142 0.84 -0.5 3,284,625 - Ga0059261_3142 0.84 +1.2 3,284,625 - Ga0059261_3142 0.84 +0.0 3,284,625 - Ga0059261_3142 0.84 -0.2 3,284,625 - Ga0059261_3142 0.84 +0.1 3,284,626 + Ga0059261_3142 0.84 -1.0 3,284,626 + Ga0059261_3142 0.84 -0.3 3,284,626 + Ga0059261_3142 0.84 -0.0 3,284,626 + Ga0059261_3142 0.84 +0.5 3,284,626 + Ga0059261_3142 0.84 +0.1 3,284,627 - Ga0059261_3142 0.84 -0.9 3,284,627 - Ga0059261_3142 0.84 -0.5 3,284,627 - Ga0059261_3142 0.84 -2.0 3,284,834 + +0.2 3,284,834 + +0.4
Or see this region's nucleotide sequence