Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2075 and Ga0059261_2076 are separated by 168 nucleotides Ga0059261_2076 and Ga0059261_2077 are separated by 9 nucleotides Ga0059261_2077 and Ga0059261_2078 are separated by 0 nucleotides
Ga0059261_2075: Ga0059261_2075 - Flagellin and related hook-associated proteins, at 2,175,172 to 2,176,629
_2075
Ga0059261_2076: Ga0059261_2076 - hypothetical protein, at 2,176,798 to 2,177,106
_2076
Ga0059261_2077: Ga0059261_2077 - Uncharacterized protein conserved in bacteria, at 2,177,116 to 2,177,469
_2077
Ga0059261_2078: Ga0059261_2078 - transcriptional regulator, ArsR family, at 2,177,470 to 2,178,138
_2078
Position (kb)
2176
2177
2178 Strain fitness (log2 ratio)
-2
-1
0
1 at 2176.003 kb on + strand, within Ga0059261_2075 at 2176.003 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.006 kb on + strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.007 kb on - strand, within Ga0059261_2075 at 2176.628 kb on - strand at 2176.628 kb on - strand at 2176.628 kb on - strand at 2176.628 kb on - strand at 2176.628 kb on - strand at 2177.011 kb on - strand, within Ga0059261_2076 at 2177.039 kb on - strand, within Ga0059261_2076 at 2177.117 kb on + strand at 2177.117 kb on + strand at 2177.117 kb on + strand at 2177.117 kb on + strand at 2177.117 kb on + strand at 2177.117 kb on + strand at 2177.118 kb on - strand at 2177.118 kb on - strand at 2177.118 kb on - strand at 2177.217 kb on + strand, within Ga0059261_2077 at 2177.247 kb on - strand, within Ga0059261_2077 at 2177.292 kb on + strand, within Ga0059261_2077 at 2177.292 kb on + strand, within Ga0059261_2077 at 2177.293 kb on - strand, within Ga0059261_2077 at 2177.453 kb on + strand at 2177.453 kb on + strand at 2177.454 kb on - strand at 2177.454 kb on - strand at 2177.454 kb on - strand at 2177.471 kb on + strand at 2177.471 kb on + strand at 2177.472 kb on - strand at 2177.472 kb on - strand at 2177.472 kb on - strand at 2177.472 kb on - strand at 2177.592 kb on + strand, within Ga0059261_2078 at 2177.592 kb on + strand, within Ga0059261_2078 at 2177.798 kb on + strand, within Ga0059261_2078 at 2177.799 kb on - strand, within Ga0059261_2078 at 2177.799 kb on - strand, within Ga0059261_2078 at 2177.799 kb on - strand, within Ga0059261_2078 at 2177.927 kb on + strand, within Ga0059261_2078 at 2177.927 kb on + strand, within Ga0059261_2078 at 2177.927 kb on + strand, within Ga0059261_2078 at 2177.927 kb on + strand, within Ga0059261_2078 at 2177.928 kb on - strand, within Ga0059261_2078 at 2177.928 kb on - strand, within Ga0059261_2078 at 2177.928 kb on - strand, within Ga0059261_2078 at 2177.928 kb on - strand, within Ga0059261_2078
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,176,003 + Ga0059261_2075 0.57 +0.3 2,176,003 + Ga0059261_2075 0.57 -1.1 2,176,006 + Ga0059261_2075 0.57 -0.2 2,176,006 + Ga0059261_2075 0.57 +0.5 2,176,006 + Ga0059261_2075 0.57 +0.2 2,176,006 + Ga0059261_2075 0.57 +0.5 2,176,006 + Ga0059261_2075 0.57 -0.1 2,176,006 + Ga0059261_2075 0.57 +0.2 2,176,006 + Ga0059261_2075 0.57 +0.1 2,176,006 + +0.1 2,176,006 + Ga0059261_2075 0.57 +0.8 2,176,006 + Ga0059261_2075 0.57 -0.5 2,176,007 - Ga0059261_2075 0.57 -0.1 2,176,007 - Ga0059261_2075 0.57 -0.6 2,176,007 - Ga0059261_2075 0.57 +0.7 2,176,007 - Ga0059261_2075 0.57 +0.6 2,176,007 - Ga0059261_2075 0.57 +0.2 2,176,007 - Ga0059261_2075 0.57 +0.4 2,176,007 - Ga0059261_2075 0.57 -0.2 2,176,007 - Ga0059261_2075 0.57 +1.3 2,176,007 - Ga0059261_2075 0.57 +0.3 2,176,628 - +0.6 2,176,628 - +0.7 2,176,628 - -0.3 2,176,628 - -0.4 2,176,628 - +0.9 2,177,011 - Ga0059261_2076 0.69 +0.3 2,177,039 - Ga0059261_2076 0.78 +0.1 2,177,117 + -2.4 2,177,117 + -0.4 2,177,117 + +0.6 2,177,117 + +0.5 2,177,117 + +0.6 2,177,117 + -0.1 2,177,118 - -0.4 2,177,118 - -1.1 2,177,118 - +0.5 2,177,217 + Ga0059261_2077 0.29 -1.9 2,177,247 - Ga0059261_2077 0.37 +0.1 2,177,292 + Ga0059261_2077 0.50 -1.4 2,177,292 + Ga0059261_2077 0.50 -0.1 2,177,293 - Ga0059261_2077 0.50 -0.2 2,177,453 + -0.0 2,177,453 + +0.3 2,177,454 - -0.3 2,177,454 - +0.6 2,177,454 - +1.3 2,177,471 + +0.4 2,177,471 + +1.1 2,177,472 - +0.1 2,177,472 - +0.4 2,177,472 - +0.1 2,177,472 - +0.8 2,177,592 + Ga0059261_2078 0.18 +0.3 2,177,592 + Ga0059261_2078 0.18 -0.5 2,177,798 + Ga0059261_2078 0.49 +0.2 2,177,799 - Ga0059261_2078 0.49 -0.5 2,177,799 - Ga0059261_2078 0.49 -0.6 2,177,799 - Ga0059261_2078 0.49 +0.0 2,177,927 + Ga0059261_2078 0.68 +0.5 2,177,927 + Ga0059261_2078 0.68 -0.6 2,177,927 + Ga0059261_2078 0.68 +1.4 2,177,927 + Ga0059261_2078 0.68 +0.1 2,177,928 - Ga0059261_2078 0.68 -0.1 2,177,928 - Ga0059261_2078 0.68 +0.1 2,177,928 - Ga0059261_2078 0.68 +0.5 2,177,928 - Ga0059261_2078 0.68 +0.5
Or see this region's nucleotide sequence