Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1935 and Ga0059261_1936 are separated by 270 nucleotides Ga0059261_1936 and Ga0059261_1937 are separated by 108 nucleotides Ga0059261_1937 and Ga0059261_1938 are separated by 150 nucleotides Ga0059261_1938 and Ga0059261_1939 are separated by 3 nucleotides
Ga0059261_1935: Ga0059261_1935 - Ferredoxin, at 2,045,274 to 2,045,615
_1935
Ga0059261_1936: Ga0059261_1936 - transcriptional regulator, CarD family, at 2,045,886 to 2,046,419
_1936
Ga0059261_1937: Ga0059261_1937 - Protein of unknown function (DUF2807), at 2,046,528 to 2,047,253
_1937
Ga0059261_1938: Ga0059261_1938 - Protein of unknown function (DUF2807), at 2,047,404 to 2,048,105
_1938
Ga0059261_1939: Ga0059261_1939 - putative phosphoesterase, at 2,048,109 to 2,048,771
_1939
Position (kb)
2046
2047
2048 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2045.719 kb on + strand at 2045.739 kb on + strand at 2045.868 kb on + strand at 2046.393 kb on + strand at 2046.393 kb on + strand at 2046.393 kb on + strand at 2046.393 kb on + strand at 2046.394 kb on - strand at 2046.394 kb on - strand at 2046.394 kb on - strand at 2046.417 kb on + strand at 2046.418 kb on - strand at 2046.418 kb on - strand at 2046.418 kb on - strand at 2046.418 kb on - strand at 2046.548 kb on + strand at 2046.548 kb on + strand at 2046.548 kb on + strand at 2046.548 kb on + strand at 2046.922 kb on + strand, within Ga0059261_1937 at 2047.106 kb on + strand, within Ga0059261_1937 at 2047.106 kb on + strand, within Ga0059261_1937 at 2047.106 kb on + strand, within Ga0059261_1937 at 2047.107 kb on - strand, within Ga0059261_1937 at 2047.798 kb on + strand, within Ga0059261_1938 at 2047.798 kb on + strand, within Ga0059261_1938 at 2047.799 kb on - strand, within Ga0059261_1938 at 2047.799 kb on - strand, within Ga0059261_1938 at 2047.799 kb on - strand, within Ga0059261_1938 at 2047.896 kb on + strand, within Ga0059261_1938 at 2047.896 kb on + strand, within Ga0059261_1938 at 2047.896 kb on + strand at 2047.896 kb on + strand, within Ga0059261_1938 at 2047.897 kb on - strand, within Ga0059261_1938 at 2047.897 kb on - strand, within Ga0059261_1938 at 2047.897 kb on - strand, within Ga0059261_1938 at 2047.947 kb on + strand, within Ga0059261_1938 at 2047.948 kb on + strand, within Ga0059261_1938 at 2047.948 kb on + strand, within Ga0059261_1938 at 2047.948 kb on + strand, within Ga0059261_1938 at 2047.948 kb on + strand, within Ga0059261_1938 at 2047.948 kb on + strand, within Ga0059261_1938 at 2047.948 kb on + strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2047.949 kb on - strand, within Ga0059261_1938 at 2048.002 kb on + strand, within Ga0059261_1938 at 2048.103 kb on + strand at 2048.104 kb on - strand at 2048.104 kb on - strand at 2048.110 kb on + strand at 2048.111 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,045,719 + +0.1 2,045,739 + +1.5 2,045,868 + +0.7 2,046,393 + -0.7 2,046,393 + -0.4 2,046,393 + +1.0 2,046,393 + -0.6 2,046,394 - -0.8 2,046,394 - +0.3 2,046,394 - -1.1 2,046,417 + +2.2 2,046,418 - -2.3 2,046,418 - +0.2 2,046,418 - +0.9 2,046,418 - -1.9 2,046,548 + +0.1 2,046,548 + -0.7 2,046,548 + +0.7 2,046,548 + +0.2 2,046,922 + Ga0059261_1937 0.54 -0.3 2,047,106 + Ga0059261_1937 0.80 -0.8 2,047,106 + Ga0059261_1937 0.80 -0.8 2,047,106 + Ga0059261_1937 0.80 -0.8 2,047,107 - Ga0059261_1937 0.80 -0.7 2,047,798 + Ga0059261_1938 0.56 +0.7 2,047,798 + Ga0059261_1938 0.56 -0.1 2,047,799 - Ga0059261_1938 0.56 -0.0 2,047,799 - Ga0059261_1938 0.56 -0.2 2,047,799 - Ga0059261_1938 0.56 +2.5 2,047,896 + Ga0059261_1938 0.70 -0.4 2,047,896 + Ga0059261_1938 0.70 -0.0 2,047,896 + +1.1 2,047,896 + Ga0059261_1938 0.70 +0.6 2,047,897 - Ga0059261_1938 0.70 -1.1 2,047,897 - Ga0059261_1938 0.70 +0.1 2,047,897 - Ga0059261_1938 0.70 -2.1 2,047,947 + Ga0059261_1938 0.77 -0.1 2,047,948 + Ga0059261_1938 0.77 +1.3 2,047,948 + Ga0059261_1938 0.77 +0.5 2,047,948 + Ga0059261_1938 0.77 +1.1 2,047,948 + Ga0059261_1938 0.77 +0.3 2,047,948 + Ga0059261_1938 0.77 -0.4 2,047,948 + Ga0059261_1938 0.77 +0.7 2,047,949 - Ga0059261_1938 0.78 -0.9 2,047,949 - Ga0059261_1938 0.78 +0.1 2,047,949 - Ga0059261_1938 0.78 -0.0 2,047,949 - Ga0059261_1938 0.78 -0.1 2,047,949 - Ga0059261_1938 0.78 -0.1 2,047,949 - Ga0059261_1938 0.78 +0.5 2,047,949 - Ga0059261_1938 0.78 +0.6 2,047,949 - Ga0059261_1938 0.78 -0.3 2,047,949 - Ga0059261_1938 0.78 +1.6 2,047,949 - Ga0059261_1938 0.78 -0.5 2,047,949 - Ga0059261_1938 0.78 +0.6 2,047,949 - Ga0059261_1938 0.78 +0.5 2,048,002 + Ga0059261_1938 0.85 +0.5 2,048,103 + +0.2 2,048,104 - -0.4 2,048,104 - -0.3 2,048,110 + +0.6 2,048,111 - +0.4
Or see this region's nucleotide sequence