Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1727 and Ga0059261_1728 are separated by 14 nucleotides Ga0059261_1728 and Ga0059261_1729 overlap by 13 nucleotides Ga0059261_1729 and Ga0059261_1730 overlap by 4 nucleotides Ga0059261_1730 and Ga0059261_1731 overlap by 4 nucleotides
Ga0059261_1727: Ga0059261_1727 - flagellar biosynthetic protein FliP, at 1,833,426 to 1,834,115
_1727
Ga0059261_1728: Ga0059261_1728 - Flagellar biosynthesis protein, FliO, at 1,834,130 to 1,834,534
_1728
Ga0059261_1729: Ga0059261_1729 - Surface presentation of antigens (SPOA), at 1,834,522 to 1,834,809
_1729
Ga0059261_1730: Ga0059261_1730 - Surface presentation of antigens (SPOA), at 1,834,806 to 1,835,573
_1730
Ga0059261_1731: Ga0059261_1731 - flagellar hook-basal body protein, at 1,835,570 to 1,836,748
_1731
Position (kb)
1834
1835
1836 Strain fitness (log2 ratio)
-1
0
1
2 at 1833.966 kb on + strand, within Ga0059261_1727 at 1833.966 kb on + strand, within Ga0059261_1727 at 1833.967 kb on - strand, within Ga0059261_1727 at 1833.967 kb on - strand, within Ga0059261_1727 at 1833.967 kb on - strand, within Ga0059261_1727 at 1834.119 kb on + strand at 1834.119 kb on + strand at 1834.119 kb on + strand at 1834.119 kb on + strand at 1834.120 kb on - strand at 1834.120 kb on - strand at 1834.120 kb on - strand at 1834.120 kb on - strand at 1834.120 kb on - strand at 1834.120 kb on - strand at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.203 kb on + strand, within Ga0059261_1728 at 1834.204 kb on - strand, within Ga0059261_1728 at 1834.204 kb on - strand, within Ga0059261_1728 at 1834.204 kb on - strand, within Ga0059261_1728 at 1834.204 kb on - strand, within Ga0059261_1728 at 1834.404 kb on - strand, within Ga0059261_1728 at 1834.404 kb on - strand, within Ga0059261_1728 at 1834.404 kb on - strand, within Ga0059261_1728 at 1834.404 kb on - strand, within Ga0059261_1728 at 1834.404 kb on - strand, within Ga0059261_1728 at 1834.404 kb on - strand at 1834.409 kb on - strand, within Ga0059261_1728 at 1834.695 kb on + strand, within Ga0059261_1729 at 1834.695 kb on + strand, within Ga0059261_1729 at 1834.696 kb on - strand, within Ga0059261_1729 at 1834.696 kb on - strand, within Ga0059261_1729 at 1834.696 kb on - strand at 1834.696 kb on - strand at 1834.696 kb on - strand, within Ga0059261_1729 at 1834.696 kb on - strand, within Ga0059261_1729 at 1834.759 kb on + strand, within Ga0059261_1729 at 1834.759 kb on + strand, within Ga0059261_1729 at 1834.783 kb on + strand at 1834.784 kb on - strand at 1834.795 kb on + strand at 1834.796 kb on - strand at 1835.158 kb on + strand, within Ga0059261_1730 at 1835.158 kb on + strand, within Ga0059261_1730 at 1835.158 kb on + strand, within Ga0059261_1730 at 1835.158 kb on + strand, within Ga0059261_1730 at 1835.159 kb on - strand, within Ga0059261_1730 at 1835.376 kb on + strand, within Ga0059261_1730 at 1835.513 kb on + strand at 1835.699 kb on - strand, within Ga0059261_1731 at 1835.878 kb on - strand, within Ga0059261_1731 at 1835.878 kb on - strand, within Ga0059261_1731 at 1835.878 kb on - strand, within Ga0059261_1731 at 1835.878 kb on - strand, within Ga0059261_1731 at 1836.022 kb on + strand, within Ga0059261_1731 at 1836.022 kb on + strand, within Ga0059261_1731 at 1836.022 kb on + strand, within Ga0059261_1731 at 1836.023 kb on - strand, within Ga0059261_1731 at 1836.045 kb on - strand, within Ga0059261_1731 at 1836.046 kb on + strand, within Ga0059261_1731 at 1836.047 kb on - strand, within Ga0059261_1731 at 1836.217 kb on + strand, within Ga0059261_1731 at 1836.217 kb on + strand, within Ga0059261_1731 at 1836.217 kb on + strand, within Ga0059261_1731 at 1836.217 kb on + strand, within Ga0059261_1731 at 1836.218 kb on - strand, within Ga0059261_1731 at 1836.218 kb on - strand, within Ga0059261_1731 at 1836.218 kb on - strand, within Ga0059261_1731 at 1836.218 kb on - strand, within Ga0059261_1731 at 1836.228 kb on + strand, within Ga0059261_1731 at 1836.228 kb on + strand, within Ga0059261_1731 at 1836.229 kb on - strand, within Ga0059261_1731 at 1836.229 kb on - strand, within Ga0059261_1731 at 1836.229 kb on - strand, within Ga0059261_1731 at 1836.287 kb on + strand, within Ga0059261_1731 at 1836.287 kb on + strand, within Ga0059261_1731 at 1836.287 kb on + strand, within Ga0059261_1731 at 1836.287 kb on + strand, within Ga0059261_1731 at 1836.288 kb on - strand, within Ga0059261_1731 at 1836.288 kb on - strand, within Ga0059261_1731 at 1836.288 kb on - strand, within Ga0059261_1731 at 1836.288 kb on - strand, within Ga0059261_1731 at 1836.288 kb on - strand, within Ga0059261_1731 at 1836.366 kb on + strand, within Ga0059261_1731 at 1836.367 kb on - strand, within Ga0059261_1731 at 1836.367 kb on - strand, within Ga0059261_1731 at 1836.367 kb on - strand, within Ga0059261_1731 at 1836.426 kb on + strand, within Ga0059261_1731 at 1836.427 kb on + strand, within Ga0059261_1731 at 1836.427 kb on + strand, within Ga0059261_1731 at 1836.427 kb on + strand, within Ga0059261_1731 at 1836.427 kb on + strand, within Ga0059261_1731 at 1836.427 kb on + strand, within Ga0059261_1731 at 1836.428 kb on - strand, within Ga0059261_1731 at 1836.428 kb on - strand, within Ga0059261_1731 at 1836.428 kb on - strand at 1836.428 kb on - strand, within Ga0059261_1731 at 1836.429 kb on + strand, within Ga0059261_1731 at 1836.429 kb on + strand, within Ga0059261_1731 at 1836.429 kb on + strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731 at 1836.430 kb on - strand, within Ga0059261_1731
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 1,833,966 + Ga0059261_1727 0.78 -1.1 1,833,966 + Ga0059261_1727 0.78 -0.1 1,833,967 - Ga0059261_1727 0.78 -1.5 1,833,967 - Ga0059261_1727 0.78 -0.5 1,833,967 - Ga0059261_1727 0.78 +1.1 1,834,119 + +0.5 1,834,119 + -0.9 1,834,119 + -0.2 1,834,119 + +0.0 1,834,120 - +0.4 1,834,120 - -0.1 1,834,120 - -1.0 1,834,120 - -0.5 1,834,120 - -1.0 1,834,120 - -0.5 1,834,203 + Ga0059261_1728 0.18 -0.3 1,834,203 + Ga0059261_1728 0.18 -0.5 1,834,203 + Ga0059261_1728 0.18 -1.3 1,834,203 + Ga0059261_1728 0.18 +0.3 1,834,203 + Ga0059261_1728 0.18 +0.2 1,834,203 + Ga0059261_1728 0.18 +0.2 1,834,203 + Ga0059261_1728 0.18 -1.1 1,834,203 + Ga0059261_1728 0.18 +1.2 1,834,204 - Ga0059261_1728 0.18 +0.7 1,834,204 - Ga0059261_1728 0.18 +0.3 1,834,204 - Ga0059261_1728 0.18 +0.0 1,834,204 - Ga0059261_1728 0.18 -0.7 1,834,404 - Ga0059261_1728 0.68 +1.8 1,834,404 - Ga0059261_1728 0.68 -0.7 1,834,404 - Ga0059261_1728 0.68 -0.7 1,834,404 - Ga0059261_1728 0.68 -0.1 1,834,404 - Ga0059261_1728 0.68 -0.2 1,834,404 - +1.1 1,834,409 - Ga0059261_1728 0.69 -1.6 1,834,695 + Ga0059261_1729 0.60 -0.6 1,834,695 + Ga0059261_1729 0.60 -0.4 1,834,696 - Ga0059261_1729 0.60 -0.5 1,834,696 - Ga0059261_1729 0.60 -0.1 1,834,696 - +0.1 1,834,696 - -0.3 1,834,696 - Ga0059261_1729 0.60 -0.7 1,834,696 - Ga0059261_1729 0.60 +0.8 1,834,759 + Ga0059261_1729 0.82 -0.5 1,834,759 + Ga0059261_1729 0.82 +0.3 1,834,783 + +0.0 1,834,784 - +0.7 1,834,795 + -0.6 1,834,796 - -0.3 1,835,158 + Ga0059261_1730 0.46 +0.5 1,835,158 + Ga0059261_1730 0.46 +0.3 1,835,158 + Ga0059261_1730 0.46 -1.0 1,835,158 + Ga0059261_1730 0.46 +0.6 1,835,159 - Ga0059261_1730 0.46 -0.3 1,835,376 + Ga0059261_1730 0.74 +0.4 1,835,513 + +0.6 1,835,699 - Ga0059261_1731 0.11 +0.2 1,835,878 - Ga0059261_1731 0.26 -0.9 1,835,878 - Ga0059261_1731 0.26 -0.1 1,835,878 - Ga0059261_1731 0.26 -0.9 1,835,878 - Ga0059261_1731 0.26 -0.4 1,836,022 + Ga0059261_1731 0.38 +0.0 1,836,022 + Ga0059261_1731 0.38 +0.7 1,836,022 + Ga0059261_1731 0.38 +0.4 1,836,023 - Ga0059261_1731 0.38 -0.1 1,836,045 - Ga0059261_1731 0.40 -0.2 1,836,046 + Ga0059261_1731 0.40 -0.3 1,836,047 - Ga0059261_1731 0.40 +0.2 1,836,217 + Ga0059261_1731 0.55 -0.7 1,836,217 + Ga0059261_1731 0.55 -0.2 1,836,217 + Ga0059261_1731 0.55 -0.5 1,836,217 + Ga0059261_1731 0.55 -0.5 1,836,218 - Ga0059261_1731 0.55 +0.1 1,836,218 - Ga0059261_1731 0.55 -0.9 1,836,218 - Ga0059261_1731 0.55 +1.1 1,836,218 - Ga0059261_1731 0.55 +0.1 1,836,228 + Ga0059261_1731 0.56 -0.0 1,836,228 + Ga0059261_1731 0.56 -0.3 1,836,229 - Ga0059261_1731 0.56 -1.6 1,836,229 - Ga0059261_1731 0.56 -0.1 1,836,229 - Ga0059261_1731 0.56 +0.4 1,836,287 + Ga0059261_1731 0.61 +1.0 1,836,287 + Ga0059261_1731 0.61 -0.3 1,836,287 + Ga0059261_1731 0.61 +0.1 1,836,287 + Ga0059261_1731 0.61 -0.3 1,836,288 - Ga0059261_1731 0.61 +0.1 1,836,288 - Ga0059261_1731 0.61 -0.9 1,836,288 - Ga0059261_1731 0.61 +0.7 1,836,288 - Ga0059261_1731 0.61 +0.6 1,836,288 - Ga0059261_1731 0.61 -0.4 1,836,366 + Ga0059261_1731 0.68 -0.7 1,836,367 - Ga0059261_1731 0.68 +0.1 1,836,367 - Ga0059261_1731 0.68 +0.2 1,836,367 - Ga0059261_1731 0.68 +0.6 1,836,426 + Ga0059261_1731 0.73 -0.7 1,836,427 + Ga0059261_1731 0.73 -0.1 1,836,427 + Ga0059261_1731 0.73 -0.5 1,836,427 + Ga0059261_1731 0.73 -0.4 1,836,427 + Ga0059261_1731 0.73 -0.6 1,836,427 + Ga0059261_1731 0.73 -0.1 1,836,428 - Ga0059261_1731 0.73 -0.2 1,836,428 - Ga0059261_1731 0.73 +0.0 1,836,428 - -0.3 1,836,428 - Ga0059261_1731 0.73 -0.1 1,836,429 + Ga0059261_1731 0.73 +0.5 1,836,429 + Ga0059261_1731 0.73 +0.2 1,836,429 + Ga0059261_1731 0.73 -1.4 1,836,430 - Ga0059261_1731 0.73 +0.2 1,836,430 - Ga0059261_1731 0.73 +0.4 1,836,430 - Ga0059261_1731 0.73 +0.2 1,836,430 - Ga0059261_1731 0.73 -0.8 1,836,430 - Ga0059261_1731 0.73 -0.0 1,836,430 - Ga0059261_1731 0.73 -0.3 1,836,430 - Ga0059261_1731 0.73 +0.3 1,836,430 - Ga0059261_1731 0.73 -0.7 1,836,430 - Ga0059261_1731 0.73 +0.7 1,836,430 - Ga0059261_1731 0.73 -0.1 1,836,430 - Ga0059261_1731 0.73 +1.5 1,836,430 - Ga0059261_1731 0.73 +0.2
Or see this region's nucleotide sequence