Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0243 and Ga0059261_0244 are separated by 59 nucleotides Ga0059261_0244 and Ga0059261_0245 are separated by 104 nucleotides Ga0059261_0245 and Ga0059261_0246 overlap by 4 nucleotides Ga0059261_0246 and Ga0059261_0247 overlap by 4 nucleotides
Ga0059261_0243: Ga0059261_0243 - Major Facilitator Superfamily, at 232,905 to 234,578
_0243
Ga0059261_0244: Ga0059261_0244 - FOG: CheY-like receiver, at 234,638 to 235,069
_0244
Ga0059261_0245: Ga0059261_0245 - pseudouridine synthase, at 235,174 to 236,376
_0245
Ga0059261_0246: Ga0059261_0246 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 236,373 to 236,909
_0246
Ga0059261_0247: Ga0059261_0247 - Arabinose efflux permease, at 236,906 to 238,168
_0247
Position (kb) 235
236
237 Strain fitness (log2 ratio) -2
-1
0
1 at 234.370 kb on + strand, within Ga0059261_0243 at 234.370 kb on + strand at 234.370 kb on + strand, within Ga0059261_0243 at 234.371 kb on - strand, within Ga0059261_0243 at 234.371 kb on - strand at 234.371 kb on - strand, within Ga0059261_0243 at 234.371 kb on - strand, within Ga0059261_0243 at 234.410 kb on + strand, within Ga0059261_0243 at 234.410 kb on + strand, within Ga0059261_0243 at 234.410 kb on + strand, within Ga0059261_0243 at 234.411 kb on - strand at 234.411 kb on - strand at 234.411 kb on - strand at 234.411 kb on - strand at 234.520 kb on + strand at 234.611 kb on - strand at 234.747 kb on + strand, within Ga0059261_0244 at 234.747 kb on + strand, within Ga0059261_0244 at 234.965 kb on - strand, within Ga0059261_0244 at 235.086 kb on + strand at 235.086 kb on + strand at 235.086 kb on + strand at 235.087 kb on - strand at 235.105 kb on - strand at 235.105 kb on - strand at 235.161 kb on + strand at 235.162 kb on - strand at 235.466 kb on - strand, within Ga0059261_0245 at 235.607 kb on - strand, within Ga0059261_0245 at 235.621 kb on + strand, within Ga0059261_0245 at 235.687 kb on + strand, within Ga0059261_0245 at 236.370 kb on + strand at 236.370 kb on + strand at 236.370 kb on + strand at 236.371 kb on - strand at 236.371 kb on - strand at 236.371 kb on - strand at 236.730 kb on + strand, within Ga0059261_0246 at 236.731 kb on - strand, within Ga0059261_0246 at 236.731 kb on - strand, within Ga0059261_0246 at 236.974 kb on - strand at 236.974 kb on - strand at 236.974 kb on - strand at 237.082 kb on + strand, within Ga0059261_0247 at 237.083 kb on - strand, within Ga0059261_0247 at 237.084 kb on + strand, within Ga0059261_0247 at 237.084 kb on + strand, within Ga0059261_0247 at 237.085 kb on - strand, within Ga0059261_0247 at 237.135 kb on + strand, within Ga0059261_0247 at 237.136 kb on - strand, within Ga0059261_0247 at 237.273 kb on + strand, within Ga0059261_0247 at 237.273 kb on + strand, within Ga0059261_0247 at 237.273 kb on + strand, within Ga0059261_0247 at 237.273 kb on + strand, within Ga0059261_0247 at 237.273 kb on + strand, within Ga0059261_0247 at 237.274 kb on - strand, within Ga0059261_0247 at 237.274 kb on - strand, within Ga0059261_0247 at 237.274 kb on - strand, within Ga0059261_0247 at 237.274 kb on - strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.303 kb on + strand, within Ga0059261_0247 at 237.304 kb on - strand, within Ga0059261_0247 at 237.304 kb on - strand, within Ga0059261_0247
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 234,370 + Ga0059261_0243 0.88 +0.2 234,370 + -0.7 234,370 + Ga0059261_0243 0.88 +0.1 234,371 - Ga0059261_0243 0.88 +1.7 234,371 - -1.3 234,371 - Ga0059261_0243 0.88 -1.6 234,371 - Ga0059261_0243 0.88 -0.0 234,410 + Ga0059261_0243 0.90 +1.6 234,410 + Ga0059261_0243 0.90 +0.6 234,410 + Ga0059261_0243 0.90 -0.1 234,411 - +0.9 234,411 - -0.6 234,411 - -1.0 234,411 - +0.0 234,520 + -0.6 234,611 - +0.2 234,747 + Ga0059261_0244 0.25 -0.1 234,747 + Ga0059261_0244 0.25 +0.1 234,965 - Ga0059261_0244 0.76 +1.0 235,086 + +1.4 235,086 + +0.6 235,086 + +0.5 235,087 - +0.3 235,105 - -0.8 235,105 - +1.1 235,161 + +0.5 235,162 - +1.2 235,466 - Ga0059261_0245 0.24 +0.5 235,607 - Ga0059261_0245 0.36 -1.4 235,621 + Ga0059261_0245 0.37 -2.5 235,687 + Ga0059261_0245 0.43 -0.6 236,370 + +0.4 236,370 + -0.5 236,370 + +0.3 236,371 - -1.1 236,371 - -0.6 236,371 - +0.4 236,730 + Ga0059261_0246 0.66 -0.2 236,731 - Ga0059261_0246 0.67 -1.6 236,731 - Ga0059261_0246 0.67 -1.1 236,974 - +0.1 236,974 - -1.2 236,974 - -0.2 237,082 + Ga0059261_0247 0.14 -1.3 237,083 - Ga0059261_0247 0.14 -0.4 237,084 + Ga0059261_0247 0.14 +0.5 237,084 + Ga0059261_0247 0.14 +0.3 237,085 - Ga0059261_0247 0.14 -1.0 237,135 + Ga0059261_0247 0.18 -0.7 237,136 - Ga0059261_0247 0.18 -0.6 237,273 + Ga0059261_0247 0.29 +0.3 237,273 + Ga0059261_0247 0.29 +0.1 237,273 + Ga0059261_0247 0.29 -0.2 237,273 + Ga0059261_0247 0.29 +0.1 237,273 + Ga0059261_0247 0.29 -1.2 237,274 - Ga0059261_0247 0.29 +0.5 237,274 - Ga0059261_0247 0.29 -0.3 237,274 - Ga0059261_0247 0.29 +0.6 237,274 - Ga0059261_0247 0.29 -0.6 237,303 + Ga0059261_0247 0.31 -0.7 237,303 + Ga0059261_0247 0.31 +0.3 237,303 + Ga0059261_0247 0.31 -0.3 237,303 + Ga0059261_0247 0.31 -1.8 237,303 + Ga0059261_0247 0.31 -0.1 237,303 + Ga0059261_0247 0.31 +0.2 237,303 + Ga0059261_0247 0.31 -0.1 237,303 + Ga0059261_0247 0.31 +1.4 237,304 - Ga0059261_0247 0.32 +0.9 237,304 - Ga0059261_0247 0.32 -0.6
Or see this region's nucleotide sequence