Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03850

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
4,015,033	+				+3.3
4,015,044	+				-1.6
4,015,047	-				-0.2
4,015,060	-				+1.0
4,015,065	-		CCNA_03849	0.10	-2.3
4,015,065	-		CCNA_03849	0.10	-0.1
4,015,100	+		CCNA_03849	0.14	+0.1
4,015,103	-		CCNA_03849	0.14	-0.4
4,015,141	-		CCNA_03849	0.18	+1.7
4,015,193	+		CCNA_03849	0.23	+1.6
4,015,312	-		CCNA_03849	0.35	-0.1
4,015,364	-		CCNA_03849	0.40	-1.4
4,015,368	+		CCNA_03849	0.41	-0.2
4,015,373	+		CCNA_03849	0.41	-1.2
4,015,373	+		CCNA_03849	0.41	+0.8
4,015,394	+		CCNA_03849	0.43	+0.7
4,015,428	-		CCNA_03849	0.47	-0.8
4,015,518	+		CCNA_03849	0.56	+0.2
4,015,526	-		CCNA_03849	0.57	+2.7
4,015,565	+		CCNA_03849	0.61	+1.8
4,015,565	+		CCNA_03849	0.61	-0.2
4,015,565	+		CCNA_03849	0.61	+1.0
4,015,575	-		CCNA_03849	0.62	-0.3
4,015,606	-		CCNA_03849	0.65	-0.0
4,015,606	-		CCNA_03849	0.65	-1.5
4,015,613	+		CCNA_03849	0.65	+2.2
4,015,619	-		CCNA_03849	0.66	-0.2
4,015,638	-		CCNA_03849	0.68	-0.7
4,015,638	-		CCNA_03849	0.68	-1.5
4,015,669	+				+2.3
4,015,686	-		CCNA_03849	0.73	+0.0
4,015,904	-				-1.6
4,015,972	+				-0.3
4,015,972	+				+0.2
4,015,972	+				-0.3
4,015,972	+				+0.1
4,015,998	-				-0.9
4,016,006	+				-1.1
4,016,064	+		CCNA_03850	0.17	+0.5
4,016,074	+		CCNA_03850	0.19	+0.4
4,016,082	+		CCNA_03850	0.20	+0.9
4,016,082	+		CCNA_03850	0.20	+1.0
4,016,087	-		CCNA_03850	0.21	-2.9
4,016,107	+		CCNA_03850	0.25	+0.4
4,016,129	-		CCNA_03850	0.28	-1.8
4,016,156	+		CCNA_03850	0.33	-0.4
4,016,163	+		CCNA_03850	0.34	+0.4
4,016,163	+		CCNA_03850	0.34	+0.1
4,016,189	-		CCNA_03850	0.38	-2.3
4,016,205	+		CCNA_03850	0.41	-0.2
4,016,205	+		CCNA_03850	0.41	+0.7
4,016,213	-		CCNA_03850	0.42	-0.7
4,016,215	+		CCNA_03850	0.43	+1.0
4,016,215	+		CCNA_03850	0.43	+1.6
4,016,234	-		CCNA_03850	0.46	-1.8
4,016,244	+		CCNA_03850	0.48	-0.3
4,016,266	+		CCNA_03850	0.51	+1.0
4,016,266	+		CCNA_03850	0.51	+1.2
4,016,323	+		CCNA_03850	0.61	+0.6
4,016,333	+		CCNA_03850	0.63	-0.2
4,016,333	+		CCNA_03850	0.63	-0.4
4,016,333	+		CCNA_03850	0.63	-0.3
4,016,341	-		CCNA_03850	0.64	-1.0
4,016,363	+		CCNA_03850	0.68	+1.3
4,016,363	+		CCNA_03850	0.68	+0.5
4,016,393	+		CCNA_03850	0.73	+0.6
4,016,393	+		CCNA_03850	0.73	-0.6
4,016,401	-		CCNA_03850	0.74	-2.1
4,016,469	+		CCNA_03850	0.86	+0.8
4,016,469	+		CCNA_03850	0.86	+0.8
4,016,469	+		CCNA_03850	0.86	+0.4
4,016,470	-		CCNA_03850	0.86	-0.3
4,016,564	+				+1.7
4,016,572	+				-0.5
4,016,613	+				-0.4
4,016,622	+				-0.7
4,016,688	-		CCNA_03851	0.19	-1.5
4,016,701	-		CCNA_03851	0.21	-0.9
4,016,813	+		CCNA_03851	0.39	+0.6
4,016,841	+		CCNA_03851	0.43	-0.3
4,016,856	+		CCNA_03851	0.45	+0.7
4,016,875	+		CCNA_03851	0.48	-0.6
4,016,888	-				+0.5
4,016,944	-		CCNA_03851	0.59	-0.7
4,016,980	+		CCNA_03851	0.65	-0.1
4,016,980	+		CCNA_03851	0.65	-0.4
4,017,039	+		CCNA_03851	0.74	+0.8
4,017,116	+		CCNA_03851	0.86	+0.7
4,017,116	+		CCNA_03851	0.86	+0.7
4,017,124	-		CCNA_03851	0.87	-0.4
4,017,137	+		CCNA_03851	0.89	+0.1
4,017,145	-				+0.7
4,017,160	+				+0.2
4,017,160	+				+1.7
4,017,241	+				-1.4
4,017,276	-		CCNA_03852	0.11	-0.4
4,017,281	+		CCNA_03852	0.12	-1.7
4,017,283	+		CCNA_03852	0.12	-1.5
4,017,283	+		CCNA_03852	0.12	+0.3
4,017,289	-		CCNA_03852	0.13	-0.7
4,017,291	-		CCNA_03852	0.13	+1.0
4,017,308	+		CCNA_03852	0.16	-0.6
4,017,316	-		CCNA_03852	0.17	-0.6
4,017,361	-		CCNA_03852	0.23	+0.5
4,017,456	+		CCNA_03852	0.36	+0.1
4,017,496	-		CCNA_03852	0.41	-0.2
4,017,536	-		CCNA_03852	0.47	+0.1
4,017,536	-		CCNA_03852	0.47	-0.3
4,017,536	-		CCNA_03852	0.47	+0.6
4,017,536	-		CCNA_03852	0.47	+0.2
4,017,536	-		CCNA_03852	0.47	+0.2
4,017,536	-		CCNA_03852	0.47	+0.6
4,017,536	-		CCNA_03852	0.47	+0.3
4,017,536	-		CCNA_03852	0.47	+0.5
4,017,538	+		CCNA_03852	0.47	-1.1
4,017,538	+		CCNA_03852	0.47	-1.1