Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03267

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
3,436,405	+				-0.3
3,436,410	+				+0.2
3,436,413	-				-0.3
3,436,430	+				-0.6
3,436,438	-				-1.4
3,436,457	+				+1.7
3,436,510	-				-0.6
3,436,538	-				+0.2
3,436,570	+				-0.3
3,436,582	+				-0.1
3,436,590	-				+0.5
3,436,590	-				-0.2
3,436,617	-				-0.7
3,436,637	-				-0.3
3,436,637	-				-1.2
3,436,642	-				-1.2
3,436,661	-				+0.1
3,436,676	-				-0.8
3,436,676	-				-0.2
3,436,696	+				-0.2
3,436,703	-		CCNA_03266	0.10	+0.3
3,436,737	+		CCNA_03266	0.20	+0.3
3,436,738	-		CCNA_03266	0.21	-0.8
3,436,763	-		CCNA_03266	0.28	-2.3
3,436,852	+		CCNA_03266	0.56	-1.3
3,436,852	+		CCNA_03266	0.56	-0.2
3,436,860	-		CCNA_03266	0.58	+1.2
3,436,860	-		CCNA_03266	0.58	-0.4
3,436,860	-		CCNA_03266	0.58	-0.5
3,436,872	-		CCNA_03266	0.62	-0.6
3,436,873	+		CCNA_03266	0.62	+1.1
3,436,894	+		CCNA_03266	0.69	-0.6
3,436,897	-		CCNA_03266	0.69	+0.5
3,436,916	-		CCNA_03266	0.75	+0.1
3,436,916	-		CCNA_03266	0.75	-0.6
3,436,921	+		CCNA_03266	0.77	+0.2
3,436,923	+		CCNA_03266	0.77	+0.4
3,436,931	-		CCNA_03266	0.80	-0.3
3,436,935	+		CCNA_03266	0.81	-0.7
3,436,953	+		CCNA_03266	0.87	+0.6
3,436,953	+		CCNA_03266	0.87	-0.6
3,436,953	+		CCNA_03266	0.87	+0.7
3,436,961	-		CCNA_03266	0.89	+0.2
3,436,961	-		CCNA_03266	0.89	+0.1
3,436,961	-		CCNA_03266	0.89	+0.5
3,436,961	-		CCNA_03266	0.89	-1.7
3,436,961	-		CCNA_03266	0.89	-0.9
3,436,961	-		CCNA_03266	0.89	+0.1
3,436,963	-		CCNA_03266	0.90	-1.4
3,436,982	-				+0.2
3,436,982	-				+0.8
3,436,991	+				+0.3
3,436,991	+				+1.5
3,436,991	+				+0.6
3,436,991	+				-0.4
3,436,999	+				-0.3
3,436,999	-				-2.0
3,436,999	-				-1.4
3,436,999	-				-0.9
3,436,999	-				+0.1
3,436,999	-				-1.1
3,437,052	+				-1.3
3,437,060	-				-0.2
3,437,083	-				+0.2
3,437,083	-				-1.0
3,437,102	+				+0.4
3,437,102	+				+0.1
3,437,110	-				-1.3
3,437,128	-				-0.8
3,437,130	-				-0.9
3,437,167	+				-1.3
3,437,184	+				-0.0
3,437,221	-				-0.7
3,437,243	+				+0.7
3,437,243	+				+1.1
3,437,243	+				+1.1
3,437,251	-				-1.5
3,437,262	-				+0.7
3,437,262	-				-1.8
3,437,264	+				-1.9
3,437,280	+				+0.8
3,437,355	+				+0.4
3,437,355	+				+0.1
3,437,355	+				-0.1
3,437,397	-		CCNA_03267	0.16	+4.1
3,437,461	-		CCNA_03267	0.31	+0.7
3,437,464	+		CCNA_03267	0.31	+0.1
3,437,472	-		CCNA_03267	0.33	+3.9
3,437,520	+		CCNA_03267	0.44	-0.5
3,437,528	+		CCNA_03267	0.46	+0.2
3,437,530	+		CCNA_03267	0.47	+0.3
3,437,538	-		CCNA_03267	0.48	+0.9
3,437,550	-		CCNA_03267	0.51	+1.3
3,437,561	+		CCNA_03267	0.54	+0.7
3,437,605	-		CCNA_03267	0.64	+0.2
3,437,612	+		CCNA_03267	0.66	+1.0
3,437,623	+		CCNA_03267	0.68	+0.6
3,437,623	+		CCNA_03267	0.68	+0.7
3,437,623	+		CCNA_03267	0.68	+0.4
3,437,623	+		CCNA_03267	0.68	+1.0
3,437,631	-		CCNA_03267	0.70	-1.9
3,437,651	+		CCNA_03267	0.75	+0.3
3,437,652	-		CCNA_03267	0.75	+0.4
3,437,659	-		CCNA_03267	0.76	+2.5
3,437,696	-		CCNA_03267	0.85	-0.1
3,437,708	+		CCNA_03267	0.88	+0.9
3,437,726	-				+1.0
3,437,754	+				+1.1
3,437,754	+				-0.3
3,437,761	+				+1.3
3,437,762	-				+0.6
3,437,762	-				+0.6
3,437,762	-				-0.3
3,437,762	-				+0.8
3,437,762	-				+0.7
3,437,766	+				+1.1
3,437,767	-				-1.2
3,437,784	-				-0.7
3,437,818	-				-0.7
3,437,843	-				+0.2
3,437,859	+				-0.4
3,437,867	-		CCNA_03268	0.11	-1.3
3,437,885	-		CCNA_03268	0.16	-1.4
3,437,901	-		CCNA_03268	0.21	+0.6
3,437,908	+		CCNA_03268	0.23	+0.2
3,437,909	+		CCNA_03268	0.23	-1.7
3,437,932	+		CCNA_03268	0.29	-0.6
3,437,961	-		CCNA_03268	0.38	-0.5
3,437,969	+		CCNA_03268	0.40	+0.4
3,438,000	+		CCNA_03268	0.49	-1.6
3,438,008	-		CCNA_03268	0.51	-0.8
3,438,072	-		CCNA_03268	0.69	-1.5
3,438,072	-		CCNA_03268	0.69	-0.1
3,438,075	+		CCNA_03268	0.70	-0.1
3,438,080	+		CCNA_03268	0.71	+0.4
3,438,082	+		CCNA_03268	0.72	-0.3
3,438,088	-		CCNA_03268	0.73	+0.2
3,438,088	-		CCNA_03268	0.73	-0.1
3,438,088	-		CCNA_03268	0.73	-1.5
3,438,088	-		CCNA_03268	0.73	-0.8
3,438,089	-		CCNA_03268	0.74	+0.4
3,438,101	-		CCNA_03268	0.77	-1.7
3,438,109	+		CCNA_03268	0.79	-1.3
3,438,215	+				+1.9
3,438,264	+				+1.1
3,438,264	+				-0.8
3,438,272	-				-0.6
3,438,272	-				-1.0
3,438,389	-				+0.7
3,438,393	+				-0.5
3,438,401	-				-0.4
3,438,401	-				+1.0
3,438,415	-				-0.8
3,438,442	-				+0.6
3,438,451	+				+1.9
3,438,451	+				+0.7
3,438,451	+				+0.9
3,438,461	+				+0.0
3,438,464	-				-0.9
3,438,464	-				+0.4
3,438,515	+		CCNA_03269	0.12	-1.4
3,438,531	+		CCNA_03269	0.14	-1.5
3,438,549	+		CCNA_03269	0.16	-0.6
3,438,632	+		CCNA_03269	0.24	+2.2
3,438,632	+		CCNA_03269	0.24	-0.7
3,438,640	-		CCNA_03269	0.25	+0.6
3,438,642	+		CCNA_03269	0.25	+1.1
3,438,642	+		CCNA_03269	0.25	+0.5
3,438,646	-		CCNA_03269	0.25	-0.7
3,438,650	-		CCNA_03269	0.26	-0.5
3,438,664	+		CCNA_03269	0.27	-0.1
3,438,664	+		CCNA_03269	0.27	+0.7
3,438,664	+		CCNA_03269	0.27	-2.0
3,438,664	+		CCNA_03269	0.27	+0.3
3,438,664	+		CCNA_03269	0.27	+1.2
3,438,664	+		CCNA_03269	0.27	+0.7
3,438,672	-		CCNA_03269	0.28	+0.1
3,438,672	-		CCNA_03269	0.28	-0.9
3,438,672	-		CCNA_03269	0.28	+1.5
3,438,672	-		CCNA_03269	0.28	-0.6
3,438,672	-		CCNA_03269	0.28	+0.9
3,438,672	-		CCNA_03269	0.28	+0.7
3,438,672	-		CCNA_03269	0.28	-0.4
3,438,674	-		CCNA_03269	0.28	-2.4
3,438,696	-		CCNA_03269	0.31	-0.6
3,438,736	-		CCNA_03269	0.35	+0.3