Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01244

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
1,370,988	-		CCNA_01243	0.68	-0.3
1,370,994	+		CCNA_01243	0.68	-0.1
1,371,015	-		CCNA_01243	0.69	+0.3
1,371,027	+		CCNA_01243	0.70	+2.0
1,371,035	-		CCNA_01243	0.70	-0.3
1,371,035	-		CCNA_01243	0.70	-0.6
1,371,062	-		CCNA_01243	0.71	+0.0
1,371,062	-		CCNA_01243	0.71	+0.4
1,371,094	-		CCNA_01243	0.72	-0.7
1,371,124	+		CCNA_01243	0.74	-0.5
1,371,188	+		CCNA_01243	0.76	-0.4
1,371,196	-		CCNA_01243	0.77	-2.2
1,371,203	+		CCNA_01243	0.77	-0.8
1,371,211	-		CCNA_01243	0.77	-0.8
1,371,223	-		CCNA_01243	0.78	-1.3
1,371,240	+		CCNA_01243	0.78	-1.5
1,371,240	+		CCNA_01243	0.78	+0.3
1,371,240	+		CCNA_01243	0.78	+0.5
1,371,240	+		CCNA_01243	0.78	-0.2
1,371,294	+		CCNA_01243	0.81	+0.2
1,371,341	+		CCNA_01243	0.82	-1.9
1,371,365	+		CCNA_01243	0.83	+0.6
1,371,370	+		CCNA_01243	0.84	-0.9
1,371,373	-		CCNA_01243	0.84	+0.3
1,371,373	-		CCNA_01243	0.84	+0.0
1,371,378	-		CCNA_01243	0.84	+0.2
1,371,378	-		CCNA_01243	0.84	+1.6
1,371,379	+		CCNA_01243	0.84	+2.1
1,371,396	+		CCNA_01243	0.85	-0.2
1,371,406	+		CCNA_01243	0.85	-0.5
1,371,407	-		CCNA_01243	0.85	+0.3
1,371,409	-		CCNA_01243	0.85	+1.7
1,371,421	+		CCNA_01243	0.86	-1.3
1,371,442	-		CCNA_01243	0.87	+0.1
1,371,539	+				+1.3
1,371,547	-				-1.2
1,371,547	-				+0.6
1,371,673	+				+0.9
1,371,673	+				-0.2
1,371,674	+				+0.4
1,371,674	+				+0.2
1,371,686	+				+0.3
1,371,710	+				+0.2
1,371,710	+				+0.4
1,371,777	-				-0.9
1,371,777	-				-0.3
1,371,784	+				+0.8
1,371,804	+				+0.2
1,371,836	+				+0.0
1,371,836	+				-0.5
1,371,843	-				-1.4
1,371,854	-				-1.1
1,371,861	+				-0.5
1,371,877	-				+0.1
1,371,896	-				-1.4
1,371,896	-				-1.6
1,371,946	+				-1.4
1,371,946	-				-1.2
1,371,946	-				-0.6
1,371,956	-		CCNA_01244	0.11	+0.5
1,372,034	-		CCNA_01244	0.30	-1.7
1,372,044	-		CCNA_01244	0.32	+1.3
1,372,044	-		CCNA_01244	0.32	+0.6
1,372,164	-		CCNA_01244	0.62	-1.3
1,372,170	+		CCNA_01244	0.63	-0.1
1,372,173	-		CCNA_01244	0.64	-0.4
1,372,185	+		CCNA_01244	0.67	+0.1
1,372,188	-		CCNA_01244	0.67	-0.7
1,372,193	-		CCNA_01244	0.69	-1.1
1,372,266	+		CCNA_01244	0.87	-1.0
1,372,266	+		CCNA_01244	0.87	+0.4
1,372,281	+				+1.3
1,372,316	-				-0.7
1,372,349	+				+0.6
1,372,350	+				+0.2
1,372,350	+				+0.7
1,372,358	-				-1.5
1,372,358	-				-2.1
1,372,385	-				-1.1
1,372,397	-				-0.9
1,372,429	+				-0.7
1,372,437	-				-1.5
1,372,437	-				-0.5
1,372,437	-				-0.7
1,372,439	+				+1.3
1,372,447	+				+0.7
1,372,447	-				+1.6
1,372,455	-				+0.5
1,372,455	-				+0.1
1,372,455	-				+2.0
1,372,465	-				-0.5
1,372,550	+				-0.6
1,372,550	-				-0.0
1,372,575	+				+0.1
1,372,576	+				+0.7
1,372,617	+				-0.7
1,372,625	-				+0.6
1,372,627	+				-1.4
1,372,627	+				-0.4
1,372,627	+				-0.4
1,372,635	-				-0.2
1,372,674	+				-1.7
1,372,745	-		CCNA_01245	0.15	-0.4
1,372,766	-		CCNA_01245	0.17	-1.7
1,372,785	+		CCNA_01245	0.20	+0.3
1,372,820	+		CCNA_01245	0.24	+0.0
1,372,830	-		CCNA_01245	0.25	+0.3
1,372,833	-		CCNA_01245	0.26	+0.5
1,372,849	+		CCNA_01245	0.28	+0.0
1,372,920	-		CCNA_01245	0.37	+1.3
1,372,930	+		CCNA_01245	0.38	-1.2
1,372,938	-		CCNA_01245	0.39	-0.1
1,372,974	+		CCNA_01245	0.43	+0.0
1,373,043	-		CCNA_01245	0.52	+0.5
1,373,063	-		CCNA_01245	0.55	+0.0
1,373,082	-		CCNA_01245	0.57	-0.0
1,373,107	-		CCNA_01245	0.60	-0.2
1,373,129	+		CCNA_01245	0.63	+1.3
1,373,129	+		CCNA_01245	0.63	+1.1
1,373,129	+		CCNA_01245	0.63	-0.8
1,373,129	+		CCNA_01245	0.63	-0.6
1,373,129	-		CCNA_01245	0.63	+0.3
1,373,136	-		CCNA_01245	0.64	+0.9
1,373,137	-		CCNA_01245	0.64	+0.1
1,373,137	-		CCNA_01245	0.64	+0.2
1,373,137	-		CCNA_01245	0.64	-1.9
1,373,137	-		CCNA_01245	0.64	-0.2
1,373,137	-		CCNA_01245	0.64	+1.0
1,373,137	-		CCNA_01245	0.64	+0.2
1,373,137	-		CCNA_01245	0.64	-0.6
1,373,137	-		CCNA_01245	0.64	+1.0
1,373,137	-		CCNA_01245	0.64	+1.3
1,373,137	-		CCNA_01245	0.64	+0.3
1,373,137	-		CCNA_01245	0.64	-0.0