Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21735 and ABZR86_RS21740 are separated by 113 nucleotides ABZR86_RS21740 and ABZR86_RS21745 overlap by 14 nucleotides ABZR86_RS21745 and ABZR86_RS21750 are separated by 30 nucleotides ABZR86_RS21750 and ABZR86_RS21755 are separated by 110 nucleotides
ABZR86_RS21735: ABZR86_RS21735 - mechanosensitive ion channel domain-containing protein, at 322,004 to 323,110
_RS21735
ABZR86_RS21740: ABZR86_RS21740 - ATP-binding protein, at 323,224 to 323,913
_RS21740
ABZR86_RS21745: ABZR86_RS21745 - mismatch-specific DNA-glycosylase, at 323,900 to 324,433
_RS21745
ABZR86_RS21750: ABZR86_RS21750 - GFA family protein, at 324,464 to 324,811
_RS21750
ABZR86_RS21755: ABZR86_RS21755 - cytochrome c, at 324,922 to 326,211
_RS21755
Position (kb) 323
324
325 Strain fitness (log2 ratio) -2
-1
0
1 at 322.962 kb on + strand, within ABZR86_RS21735 at 323.190 kb on + strand at 323.190 kb on + strand at 323.217 kb on + strand at 323.217 kb on + strand at 323.217 kb on + strand at 323.218 kb on - strand at 323.218 kb on - strand at 323.218 kb on - strand at 323.218 kb on - strand at 323.347 kb on + strand, within ABZR86_RS21740 at 323.347 kb on + strand, within ABZR86_RS21740 at 323.348 kb on - strand, within ABZR86_RS21740 at 323.348 kb on - strand, within ABZR86_RS21740 at 323.461 kb on + strand, within ABZR86_RS21740 at 323.461 kb on + strand, within ABZR86_RS21740 at 323.461 kb on + strand, within ABZR86_RS21740 at 323.462 kb on - strand, within ABZR86_RS21740 at 323.462 kb on - strand, within ABZR86_RS21740 at 323.462 kb on - strand, within ABZR86_RS21740 at 323.804 kb on - strand, within ABZR86_RS21740 at 323.804 kb on - strand, within ABZR86_RS21740 at 323.878 kb on + strand at 323.878 kb on + strand at 324.008 kb on + strand, within ABZR86_RS21745 at 324.008 kb on + strand, within ABZR86_RS21745 at 324.009 kb on - strand, within ABZR86_RS21745 at 324.011 kb on + strand, within ABZR86_RS21745 at 324.012 kb on - strand, within ABZR86_RS21745 at 324.012 kb on - strand, within ABZR86_RS21745 at 324.012 kb on - strand, within ABZR86_RS21745 at 324.012 kb on - strand, within ABZR86_RS21745 at 324.012 kb on - strand, within ABZR86_RS21745 at 324.431 kb on + strand at 324.431 kb on + strand at 324.431 kb on + strand at 324.431 kb on + strand at 324.431 kb on + strand at 324.432 kb on - strand at 324.569 kb on + strand, within ABZR86_RS21750 at 324.569 kb on + strand, within ABZR86_RS21750 at 324.569 kb on + strand, within ABZR86_RS21750 at 324.635 kb on + strand, within ABZR86_RS21750 at 324.635 kb on + strand, within ABZR86_RS21750 at 324.636 kb on - strand, within ABZR86_RS21750 at 324.828 kb on + strand at 324.829 kb on - strand at 324.829 kb on - strand at 324.829 kb on - strand at 324.829 kb on - strand at 324.829 kb on - strand at 324.829 kb on - strand at 324.912 kb on + strand at 324.936 kb on + strand at 324.936 kb on + strand at 324.937 kb on - strand at 324.937 kb on - strand at 324.945 kb on - strand at 324.945 kb on - strand at 325.004 kb on + strand at 325.004 kb on + strand at 325.004 kb on + strand at 325.004 kb on + strand at 325.004 kb on + strand at 325.005 kb on - strand at 325.005 kb on - strand at 325.005 kb on - strand at 325.005 kb on - strand at 325.065 kb on - strand, within ABZR86_RS21755 at 325.065 kb on - strand, within ABZR86_RS21755 at 325.065 kb on - strand, within ABZR86_RS21755 at 325.232 kb on + strand, within ABZR86_RS21755 at 325.232 kb on + strand, within ABZR86_RS21755 at 325.233 kb on - strand, within ABZR86_RS21755 at 325.267 kb on - strand, within ABZR86_RS21755 at 325.286 kb on + strand, within ABZR86_RS21755 at 325.287 kb on - strand, within ABZR86_RS21755 at 325.322 kb on + strand, within ABZR86_RS21755 at 325.322 kb on + strand, within ABZR86_RS21755 at 325.322 kb on + strand, within ABZR86_RS21755 at 325.323 kb on - strand, within ABZR86_RS21755 at 325.323 kb on - strand, within ABZR86_RS21755 at 325.323 kb on - strand, within ABZR86_RS21755 at 325.323 kb on - strand, within ABZR86_RS21755
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 322,962 + ABZR86_RS21735 0.87 +0.2 323,190 + +0.5 323,190 + +1.0 323,217 + -0.3 323,217 + +0.8 323,217 + -0.2 323,218 - +0.9 323,218 - +0.7 323,218 - +0.5 323,218 - -0.9 323,347 + ABZR86_RS21740 0.18 +0.3 323,347 + ABZR86_RS21740 0.18 -0.4 323,348 - ABZR86_RS21740 0.18 -0.9 323,348 - ABZR86_RS21740 0.18 +1.7 323,461 + ABZR86_RS21740 0.34 -0.3 323,461 + ABZR86_RS21740 0.34 +0.2 323,461 + ABZR86_RS21740 0.34 -0.2 323,462 - ABZR86_RS21740 0.34 +0.8 323,462 - ABZR86_RS21740 0.34 -0.4 323,462 - ABZR86_RS21740 0.34 -0.3 323,804 - ABZR86_RS21740 0.84 +0.1 323,804 - ABZR86_RS21740 0.84 +0.2 323,878 + +0.7 323,878 + +0.6 324,008 + ABZR86_RS21745 0.20 -0.3 324,008 + ABZR86_RS21745 0.20 +0.4 324,009 - ABZR86_RS21745 0.20 -0.8 324,011 + ABZR86_RS21745 0.21 -0.5 324,012 - ABZR86_RS21745 0.21 +1.0 324,012 - ABZR86_RS21745 0.21 +0.4 324,012 - ABZR86_RS21745 0.21 +0.2 324,012 - ABZR86_RS21745 0.21 +0.6 324,012 - ABZR86_RS21745 0.21 +0.3 324,431 + +0.1 324,431 + -0.7 324,431 + -0.2 324,431 + +0.8 324,431 + +0.4 324,432 - -0.2 324,569 + ABZR86_RS21750 0.30 -0.7 324,569 + ABZR86_RS21750 0.30 +0.1 324,569 + ABZR86_RS21750 0.30 +0.6 324,635 + ABZR86_RS21750 0.49 -0.5 324,635 + ABZR86_RS21750 0.49 -0.5 324,636 - ABZR86_RS21750 0.49 -0.0 324,828 + +0.4 324,829 - -0.1 324,829 - -0.4 324,829 - +1.7 324,829 - +1.0 324,829 - -0.4 324,829 - -0.6 324,912 + -1.4 324,936 + +1.6 324,936 + -0.0 324,937 - +0.3 324,937 - +0.0 324,945 - -1.3 324,945 - +0.6 325,004 + -0.1 325,004 + -0.2 325,004 + +0.5 325,004 + +0.5 325,004 + +0.5 325,005 - +0.3 325,005 - +0.7 325,005 - +0.9 325,005 - +0.5 325,065 - ABZR86_RS21755 0.11 +0.3 325,065 - ABZR86_RS21755 0.11 +0.0 325,065 - ABZR86_RS21755 0.11 +0.5 325,232 + ABZR86_RS21755 0.24 +0.4 325,232 + ABZR86_RS21755 0.24 -0.3 325,233 - ABZR86_RS21755 0.24 -0.4 325,267 - ABZR86_RS21755 0.27 +0.4 325,286 + ABZR86_RS21755 0.28 -0.9 325,287 - ABZR86_RS21755 0.28 +0.2 325,322 + ABZR86_RS21755 0.31 -0.7 325,322 + ABZR86_RS21755 0.31 +0.3 325,322 + ABZR86_RS21755 0.31 -2.0 325,323 - ABZR86_RS21755 0.31 -1.0 325,323 - ABZR86_RS21755 0.31 -0.6 325,323 - ABZR86_RS21755 0.31 -0.5 325,323 - ABZR86_RS21755 0.31 +0.2
Or see this region's nucleotide sequence