Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14620 and ABZR86_RS14625 are separated by 222 nucleotides ABZR86_RS14625 and ABZR86_RS14630 are separated by 558 nucleotides
ABZR86_RS14620: ABZR86_RS14620 - response regulator transcription factor, at 3,269,766 to 3,270,401
_RS14620
ABZR86_RS14625: ABZR86_RS14625 - EF-hand domain-containing protein, at 3,270,624 to 3,270,935
_RS14625
ABZR86_RS14630: ABZR86_RS14630 - serine protease, at 3,271,494 to 3,273,470
_RS14630
Position (kb)
3270
3271 Strain fitness (log2 ratio)
-1
0
1 at 3270.017 kb on + strand, within ABZR86_RS14620 at 3270.109 kb on + strand, within ABZR86_RS14620 at 3270.110 kb on - strand, within ABZR86_RS14620 at 3270.111 kb on + strand, within ABZR86_RS14620 at 3270.112 kb on - strand, within ABZR86_RS14620 at 3270.112 kb on - strand, within ABZR86_RS14620 at 3270.112 kb on - strand, within ABZR86_RS14620 at 3270.112 kb on - strand, within ABZR86_RS14620 at 3270.312 kb on + strand, within ABZR86_RS14620 at 3270.313 kb on - strand, within ABZR86_RS14620 at 3270.431 kb on + strand at 3270.435 kb on - strand at 3270.435 kb on - strand at 3270.439 kb on + strand at 3270.439 kb on + strand at 3270.439 kb on + strand at 3270.439 kb on + strand at 3270.440 kb on - strand at 3270.440 kb on - strand at 3270.440 kb on - strand at 3270.462 kb on + strand at 3270.463 kb on - strand at 3270.463 kb on - strand at 3270.705 kb on + strand, within ABZR86_RS14625 at 3270.716 kb on + strand, within ABZR86_RS14625 at 3270.961 kb on - strand at 3270.961 kb on - strand at 3270.961 kb on - strand at 3270.964 kb on - strand at 3271.477 kb on + strand at 3271.495 kb on + strand at 3271.496 kb on - strand at 3271.591 kb on + strand at 3271.591 kb on + strand at 3271.592 kb on - strand at 3271.596 kb on - strand at 3271.712 kb on - strand, within ABZR86_RS14630 at 3271.857 kb on + strand, within ABZR86_RS14630 at 3271.858 kb on - strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,270,017 + ABZR86_RS14620 0.39 -0.2 3,270,109 + ABZR86_RS14620 0.54 +1.4 3,270,110 - ABZR86_RS14620 0.54 +0.0 3,270,111 + ABZR86_RS14620 0.54 +0.1 3,270,112 - ABZR86_RS14620 0.54 +0.7 3,270,112 - ABZR86_RS14620 0.54 +0.7 3,270,112 - ABZR86_RS14620 0.54 +0.3 3,270,112 - ABZR86_RS14620 0.54 +0.2 3,270,312 + ABZR86_RS14620 0.86 -0.1 3,270,313 - ABZR86_RS14620 0.86 +0.1 3,270,431 + -0.1 3,270,435 - +0.4 3,270,435 - +0.1 3,270,439 + -0.5 3,270,439 + -0.3 3,270,439 + -0.4 3,270,439 + -1.1 3,270,440 - +0.1 3,270,440 - -0.4 3,270,440 - -0.1 3,270,462 + +0.2 3,270,463 - -0.7 3,270,463 - +0.4 3,270,705 + ABZR86_RS14625 0.26 +0.1 3,270,716 + ABZR86_RS14625 0.29 +0.2 3,270,961 - -0.6 3,270,961 - +0.7 3,270,961 - +0.0 3,270,964 - +0.5 3,271,477 + -1.6 3,271,495 + +0.8 3,271,496 - +0.1 3,271,591 + +0.4 3,271,591 + -0.5 3,271,592 - -0.0 3,271,596 - -0.6 3,271,712 - ABZR86_RS14630 0.11 +0.0 3,271,857 + ABZR86_RS14630 0.18 -0.7 3,271,858 - ABZR86_RS14630 0.18 -0.6 3,271,930 + ABZR86_RS14630 0.22 +0.2 3,271,930 + ABZR86_RS14630 0.22 +0.5 3,271,930 + ABZR86_RS14630 0.22 +0.2
Or see this region's nucleotide sequence