Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14355 and ABZR86_RS14360 overlap by 4 nucleotides ABZR86_RS14360 and ABZR86_RS14365 are separated by 260 nucleotides ABZR86_RS14365 and ABZR86_RS14370 are separated by 36 nucleotides ABZR86_RS14370 and ABZR86_RS14375 are separated by 148 nucleotides
ABZR86_RS14355: ABZR86_RS14355 - serine/threonine-protein kinase, at 3,200,386 to 3,202,089
_RS14355
ABZR86_RS14360: ABZR86_RS14360 - FHA domain-containing protein, at 3,202,086 to 3,202,613
_RS14360
ABZR86_RS14365: ABZR86_RS14365 - XVIPCD domain-containing protein, at 3,202,874 to 3,204,259
_RS14365
ABZR86_RS14370: ABZR86_RS14370 - hypothetical protein, at 3,204,296 to 3,205,039
_RS14370
ABZR86_RS14375: ABZR86_RS14375 - AraC family transcriptional regulator, at 3,205,188 to 3,206,027
_RS14375
Position (kb)
3202
3203
3204
3205 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.318 kb on + strand, within ABZR86_RS14360 at 3202.318 kb on + strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.388 kb on + strand, within ABZR86_RS14360 at 3202.388 kb on + strand, within ABZR86_RS14360 at 3202.388 kb on + strand, within ABZR86_RS14360 at 3202.389 kb on - strand, within ABZR86_RS14360 at 3202.559 kb on + strand, within ABZR86_RS14360 at 3202.559 kb on + strand, within ABZR86_RS14360 at 3202.560 kb on - strand, within ABZR86_RS14360 at 3202.646 kb on + strand at 3202.647 kb on - strand at 3202.647 kb on - strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.719 kb on - strand at 3202.719 kb on - strand at 3202.769 kb on + strand at 3202.770 kb on - strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.807 kb on - strand at 3203.217 kb on + strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.394 kb on + strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.436 kb on + strand, within ABZR86_RS14365 at 3203.436 kb on + strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.634 kb on + strand, within ABZR86_RS14365 at 3203.635 kb on - strand, within ABZR86_RS14365 at 3203.643 kb on + strand, within ABZR86_RS14365 at 3203.643 kb on + strand, within ABZR86_RS14365 at 3203.643 kb on + strand, within ABZR86_RS14365 at 3203.643 kb on + strand, within ABZR86_RS14365 at 3203.644 kb on - strand, within ABZR86_RS14365 at 3203.644 kb on - strand, within ABZR86_RS14365 at 3203.644 kb on - strand, within ABZR86_RS14365 at 3203.644 kb on - strand, within ABZR86_RS14365 at 3203.644 kb on - strand, within ABZR86_RS14365 at 3203.673 kb on + strand, within ABZR86_RS14365 at 3203.673 kb on + strand, within ABZR86_RS14365 at 3203.673 kb on + strand, within ABZR86_RS14365 at 3203.673 kb on + strand, within ABZR86_RS14365 at 3203.673 kb on + strand, within ABZR86_RS14365 at 3203.674 kb on - strand, within ABZR86_RS14365 at 3203.674 kb on - strand, within ABZR86_RS14365 at 3203.674 kb on - strand, within ABZR86_RS14365 at 3203.706 kb on + strand, within ABZR86_RS14365 at 3203.706 kb on + strand, within ABZR86_RS14365 at 3203.707 kb on - strand, within ABZR86_RS14365 at 3203.830 kb on - strand, within ABZR86_RS14365 at 3203.830 kb on - strand, within ABZR86_RS14365 at 3203.830 kb on - strand, within ABZR86_RS14365 at 3203.830 kb on - strand, within ABZR86_RS14365 at 3203.988 kb on + strand, within ABZR86_RS14365 at 3203.988 kb on + strand, within ABZR86_RS14365 at 3203.989 kb on - strand, within ABZR86_RS14365 at 3203.989 kb on - strand, within ABZR86_RS14365 at 3203.989 kb on - strand, within ABZR86_RS14365 at 3204.000 kb on + strand, within ABZR86_RS14365 at 3204.000 kb on + strand, within ABZR86_RS14365 at 3204.001 kb on - strand, within ABZR86_RS14365 at 3204.052 kb on - strand, within ABZR86_RS14365 at 3204.052 kb on - strand, within ABZR86_RS14365 at 3204.144 kb on + strand at 3204.144 kb on + strand at 3204.297 kb on + strand at 3204.297 kb on + strand at 3204.297 kb on + strand at 3204.298 kb on - strand at 3204.298 kb on - strand at 3204.298 kb on - strand at 3204.298 kb on - strand at 3204.298 kb on - strand at 3204.318 kb on + strand at 3204.318 kb on + strand at 3204.319 kb on - strand at 3204.319 kb on - strand at 3204.319 kb on - strand at 3204.319 kb on - strand at 3204.324 kb on + strand at 3204.325 kb on - strand at 3204.438 kb on + strand, within ABZR86_RS14370 at 3204.438 kb on + strand, within ABZR86_RS14370 at 3204.438 kb on + strand, within ABZR86_RS14370 at 3204.439 kb on - strand, within ABZR86_RS14370 at 3204.439 kb on - strand, within ABZR86_RS14370 at 3204.439 kb on - strand, within ABZR86_RS14370 at 3204.522 kb on + strand, within ABZR86_RS14370 at 3204.522 kb on + strand, within ABZR86_RS14370 at 3204.523 kb on - strand, within ABZR86_RS14370 at 3204.523 kb on - strand, within ABZR86_RS14370 at 3204.577 kb on - strand, within ABZR86_RS14370 at 3204.577 kb on - strand, within ABZR86_RS14370 at 3204.627 kb on + strand, within ABZR86_RS14370 at 3204.739 kb on - strand, within ABZR86_RS14370 at 3204.769 kb on - strand, within ABZR86_RS14370 at 3204.769 kb on - strand, within ABZR86_RS14370 at 3204.769 kb on - strand, within ABZR86_RS14370 at 3204.783 kb on + strand, within ABZR86_RS14370 at 3204.783 kb on + strand, within ABZR86_RS14370 at 3204.784 kb on - strand, within ABZR86_RS14370 at 3204.846 kb on + strand, within ABZR86_RS14370 at 3204.846 kb on + strand, within ABZR86_RS14370 at 3204.846 kb on + strand, within ABZR86_RS14370 at 3204.847 kb on - strand, within ABZR86_RS14370 at 3204.847 kb on - strand, within ABZR86_RS14370 at 3204.847 kb on - strand, within ABZR86_RS14370 at 3204.847 kb on - strand, within ABZR86_RS14370 at 3204.847 kb on - strand, within ABZR86_RS14370 at 3204.847 kb on - strand, within ABZR86_RS14370 at 3204.880 kb on + strand, within ABZR86_RS14370 at 3204.880 kb on + strand, within ABZR86_RS14370 at 3204.880 kb on + strand, within ABZR86_RS14370 at 3204.882 kb on + strand, within ABZR86_RS14370 at 3204.882 kb on + strand, within ABZR86_RS14370 at 3204.882 kb on + strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.883 kb on - strand, within ABZR86_RS14370 at 3204.909 kb on + strand, within ABZR86_RS14370 at 3204.909 kb on + strand, within ABZR86_RS14370 at 3204.910 kb on - strand, within ABZR86_RS14370 at 3204.910 kb on - strand, within ABZR86_RS14370 at 3204.910 kb on - strand, within ABZR86_RS14370 at 3204.910 kb on - strand, within ABZR86_RS14370 at 3204.921 kb on + strand, within ABZR86_RS14370 at 3205.035 kb on + strand at 3205.036 kb on - strand at 3205.036 kb on - strand at 3205.036 kb on - strand at 3205.084 kb on - strand at 3205.123 kb on + strand at 3205.123 kb on + strand at 3205.134 kb on - strand at 3205.139 kb on + strand at 3205.189 kb on + strand at 3205.189 kb on + strand at 3205.189 kb on + strand at 3205.189 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,202,007 + -0.8 3,202,007 + +0.5 3,202,007 + +2.5 3,202,007 + -0.2 3,202,007 + -1.5 3,202,008 - +0.1 3,202,008 - -0.4 3,202,008 - -0.3 3,202,008 - +0.2 3,202,008 - -0.1 3,202,008 - -0.2 3,202,318 + ABZR86_RS14360 0.44 -0.3 3,202,318 + ABZR86_RS14360 0.44 +0.5 3,202,319 - ABZR86_RS14360 0.44 +0.7 3,202,319 - ABZR86_RS14360 0.44 -0.0 3,202,319 - ABZR86_RS14360 0.44 +0.6 3,202,319 - ABZR86_RS14360 0.44 -0.9 3,202,319 - ABZR86_RS14360 0.44 -0.4 3,202,319 - ABZR86_RS14360 0.44 +0.6 3,202,388 + ABZR86_RS14360 0.57 -0.4 3,202,388 + ABZR86_RS14360 0.57 +0.4 3,202,388 + ABZR86_RS14360 0.57 -0.3 3,202,389 - ABZR86_RS14360 0.57 -0.3 3,202,559 + ABZR86_RS14360 0.90 -0.9 3,202,559 + ABZR86_RS14360 0.90 +0.2 3,202,560 - ABZR86_RS14360 0.90 +0.4 3,202,646 + +0.7 3,202,647 - -0.0 3,202,647 - +0.2 3,202,655 + +0.1 3,202,655 + -0.5 3,202,655 + -1.6 3,202,655 + +0.4 3,202,655 + -0.1 3,202,655 + -0.2 3,202,655 + -0.1 3,202,655 + -1.5 3,202,655 + -0.1 3,202,655 + +1.0 3,202,655 + -0.6 3,202,655 + +0.2 3,202,655 + +1.0 3,202,655 + -0.5 3,202,655 + -0.4 3,202,655 + +0.8 3,202,655 + -0.6 3,202,655 + -0.8 3,202,655 + +0.1 3,202,655 + -0.9 3,202,655 + -0.1 3,202,655 + -1.0 3,202,655 + +0.6 3,202,656 - +0.5 3,202,656 - -0.1 3,202,656 - +0.5 3,202,656 - -0.8 3,202,656 - -0.7 3,202,656 - +0.1 3,202,656 - -0.2 3,202,656 - -0.1 3,202,656 - +0.7 3,202,656 - -0.0 3,202,656 - +0.0 3,202,656 - +0.1 3,202,656 - -0.7 3,202,656 - -0.3 3,202,656 - -0.3 3,202,656 - +0.4 3,202,656 - +0.8 3,202,656 - +0.7 3,202,656 - -0.2 3,202,656 - -0.8 3,202,656 - -0.1 3,202,656 - +0.7 3,202,656 - -0.6 3,202,656 - +0.5 3,202,656 - +0.0 3,202,656 - -0.7 3,202,656 - +0.3 3,202,719 - +0.5 3,202,719 - -0.1 3,202,769 + -0.0 3,202,770 - -0.2 3,202,806 + -1.6 3,202,806 + +0.3 3,202,806 + -0.2 3,202,806 + +0.1 3,202,806 + +0.1 3,202,806 + +0.4 3,202,806 + -0.5 3,202,807 - -0.4 3,203,217 + ABZR86_RS14365 0.25 +1.3 3,203,218 - ABZR86_RS14365 0.25 -0.2 3,203,218 - ABZR86_RS14365 0.25 +0.3 3,203,218 - ABZR86_RS14365 0.25 -0.5 3,203,218 - ABZR86_RS14365 0.25 +0.2 3,203,218 - ABZR86_RS14365 0.25 +0.3 3,203,218 - ABZR86_RS14365 0.25 -0.5 3,203,394 + ABZR86_RS14365 0.38 -0.3 3,203,395 - ABZR86_RS14365 0.38 +0.3 3,203,395 - ABZR86_RS14365 0.38 +0.5 3,203,395 - ABZR86_RS14365 0.38 -0.2 3,203,395 - ABZR86_RS14365 0.38 +0.0 3,203,436 + ABZR86_RS14365 0.41 -1.5 3,203,436 + ABZR86_RS14365 0.41 +1.2 3,203,437 - ABZR86_RS14365 0.41 -0.0 3,203,437 - ABZR86_RS14365 0.41 -0.3 3,203,437 - ABZR86_RS14365 0.41 -0.4 3,203,437 - ABZR86_RS14365 0.41 +0.5 3,203,437 - ABZR86_RS14365 0.41 +0.2 3,203,634 + ABZR86_RS14365 0.55 -0.9 3,203,635 - ABZR86_RS14365 0.55 -0.3 3,203,643 + ABZR86_RS14365 0.55 +0.2 3,203,643 + ABZR86_RS14365 0.55 -0.2 3,203,643 + ABZR86_RS14365 0.55 -0.2 3,203,643 + ABZR86_RS14365 0.55 -0.3 3,203,644 - ABZR86_RS14365 0.56 +0.2 3,203,644 - ABZR86_RS14365 0.56 +0.2 3,203,644 - ABZR86_RS14365 0.56 -0.3 3,203,644 - ABZR86_RS14365 0.56 +0.3 3,203,644 - ABZR86_RS14365 0.56 +0.6 3,203,673 + ABZR86_RS14365 0.58 +2.6 3,203,673 + ABZR86_RS14365 0.58 -0.3 3,203,673 + ABZR86_RS14365 0.58 +0.7 3,203,673 + ABZR86_RS14365 0.58 +0.1 3,203,673 + ABZR86_RS14365 0.58 -1.1 3,203,674 - ABZR86_RS14365 0.58 -0.3 3,203,674 - ABZR86_RS14365 0.58 -0.3 3,203,674 - ABZR86_RS14365 0.58 +0.5 3,203,706 + ABZR86_RS14365 0.60 -0.3 3,203,706 + ABZR86_RS14365 0.60 +0.5 3,203,707 - ABZR86_RS14365 0.60 -0.4 3,203,830 - ABZR86_RS14365 0.69 -1.8 3,203,830 - ABZR86_RS14365 0.69 -0.4 3,203,830 - ABZR86_RS14365 0.69 -0.5 3,203,830 - ABZR86_RS14365 0.69 -1.4 3,203,988 + ABZR86_RS14365 0.80 +0.4 3,203,988 + ABZR86_RS14365 0.80 -0.3 3,203,989 - ABZR86_RS14365 0.80 +0.9 3,203,989 - ABZR86_RS14365 0.80 +0.1 3,203,989 - ABZR86_RS14365 0.80 +0.2 3,204,000 + ABZR86_RS14365 0.81 +0.0 3,204,000 + ABZR86_RS14365 0.81 +0.3 3,204,001 - ABZR86_RS14365 0.81 +0.5 3,204,052 - ABZR86_RS14365 0.85 -1.6 3,204,052 - ABZR86_RS14365 0.85 +0.8 3,204,144 + -0.1 3,204,144 + +0.9 3,204,297 + -0.9 3,204,297 + +0.5 3,204,297 + +0.2 3,204,298 - -0.0 3,204,298 - +0.6 3,204,298 - +0.4 3,204,298 - -0.3 3,204,298 - +0.1 3,204,318 + +0.4 3,204,318 + +0.4 3,204,319 - -0.3 3,204,319 - -0.6 3,204,319 - -0.0 3,204,319 - -0.4 3,204,324 + -1.2 3,204,325 - +0.3 3,204,438 + ABZR86_RS14370 0.19 -0.1 3,204,438 + ABZR86_RS14370 0.19 +0.7 3,204,438 + ABZR86_RS14370 0.19 -0.2 3,204,439 - ABZR86_RS14370 0.19 +0.9 3,204,439 - ABZR86_RS14370 0.19 -0.2 3,204,439 - ABZR86_RS14370 0.19 -0.0 3,204,522 + ABZR86_RS14370 0.30 +0.2 3,204,522 + ABZR86_RS14370 0.30 -0.8 3,204,523 - ABZR86_RS14370 0.31 -1.1 3,204,523 - ABZR86_RS14370 0.31 +0.8 3,204,577 - ABZR86_RS14370 0.38 +0.1 3,204,577 - ABZR86_RS14370 0.38 -1.2 3,204,627 + ABZR86_RS14370 0.44 +0.1 3,204,739 - ABZR86_RS14370 0.60 -1.9 3,204,769 - ABZR86_RS14370 0.64 +0.2 3,204,769 - ABZR86_RS14370 0.64 -0.1 3,204,769 - ABZR86_RS14370 0.64 -0.0 3,204,783 + ABZR86_RS14370 0.65 +0.1 3,204,783 + ABZR86_RS14370 0.65 +0.3 3,204,784 - ABZR86_RS14370 0.66 +0.1 3,204,846 + ABZR86_RS14370 0.74 -0.7 3,204,846 + ABZR86_RS14370 0.74 +1.1 3,204,846 + ABZR86_RS14370 0.74 +0.4 3,204,847 - ABZR86_RS14370 0.74 +0.4 3,204,847 - ABZR86_RS14370 0.74 -0.4 3,204,847 - ABZR86_RS14370 0.74 -1.0 3,204,847 - ABZR86_RS14370 0.74 +0.9 3,204,847 - ABZR86_RS14370 0.74 -0.1 3,204,847 - ABZR86_RS14370 0.74 +0.1 3,204,880 + ABZR86_RS14370 0.78 -1.3 3,204,880 + ABZR86_RS14370 0.78 +0.1 3,204,880 + ABZR86_RS14370 0.78 -0.1 3,204,882 + ABZR86_RS14370 0.79 +0.0 3,204,882 + ABZR86_RS14370 0.79 +0.5 3,204,882 + ABZR86_RS14370 0.79 -0.6 3,204,883 - ABZR86_RS14370 0.79 -0.2 3,204,883 - ABZR86_RS14370 0.79 +0.1 3,204,883 - ABZR86_RS14370 0.79 +0.4 3,204,883 - ABZR86_RS14370 0.79 -1.1 3,204,883 - ABZR86_RS14370 0.79 +0.8 3,204,883 - ABZR86_RS14370 0.79 +0.3 3,204,883 - ABZR86_RS14370 0.79 -0.1 3,204,883 - ABZR86_RS14370 0.79 +0.2 3,204,909 + ABZR86_RS14370 0.82 -0.6 3,204,909 + ABZR86_RS14370 0.82 +1.0 3,204,910 - ABZR86_RS14370 0.83 +0.6 3,204,910 - ABZR86_RS14370 0.83 +0.6 3,204,910 - ABZR86_RS14370 0.83 +1.3 3,204,910 - ABZR86_RS14370 0.83 -1.5 3,204,921 + ABZR86_RS14370 0.84 +0.3 3,205,035 + -0.1 3,205,036 - +0.6 3,205,036 - +0.1 3,205,036 - -0.6 3,205,084 - +0.0 3,205,123 + -1.9 3,205,123 + -1.3 3,205,134 - +0.1 3,205,139 + -0.0 3,205,189 + -0.1 3,205,189 + +0.7 3,205,189 + -0.7 3,205,189 + +0.7
Or see this region's nucleotide sequence