Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06815

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS06810 and ABZR86_RS06815 are separated by 162 nucleotidesABZR86_RS06815 and ABZR86_RS06820 are separated by 418 nucleotides ABZR86_RS06810: ABZR86_RS06810 - phospholipase D-like domain-containing protein, at 1,497,547 to 1,499,019 _RS06810 ABZR86_RS06815: ABZR86_RS06815 - exodeoxyribonuclease VII large subunit, at 1,499,182 to 1,500,531 _RS06815 ABZR86_RS06820: ABZR86_RS06820 - recombinase family protein, at 1,500,950 to 1,502,581 _RS06820 Position (kb) 1499 1500 1501Strain fitness (log2 ratio) -2 -1 0 1 2at 1498.240 kb on + strand, within ABZR86_RS06810at 1498.240 kb on + strand, within ABZR86_RS06810at 1498.240 kb on + strand, within ABZR86_RS06810at 1498.300 kb on + strand, within ABZR86_RS06810at 1498.300 kb on + strand, within ABZR86_RS06810at 1498.300 kb on + strand, within ABZR86_RS06810at 1498.301 kb on - strand, within ABZR86_RS06810at 1498.301 kb on - strand, within ABZR86_RS06810at 1498.301 kb on - strand, within ABZR86_RS06810at 1498.301 kb on - strand, within ABZR86_RS06810at 1498.301 kb on - strand, within ABZR86_RS06810at 1498.301 kb on - strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.321 kb on + strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.322 kb on - strand, within ABZR86_RS06810at 1498.542 kb on + strand, within ABZR86_RS06810at 1498.542 kb on + strand, within ABZR86_RS06810at 1498.542 kb on + strand, within ABZR86_RS06810at 1498.543 kb on - strand, within ABZR86_RS06810at 1498.621 kb on + strand, within ABZR86_RS06810at 1498.622 kb on - strand, within ABZR86_RS06810at 1499.035 kb on + strandat 1499.035 kb on + strandat 1499.035 kb on + strandat 1499.035 kb on + strandat 1499.036 kb on - strandat 1499.036 kb on - strandat 1499.036 kb on - strandat 1499.036 kb on - strandat 1499.036 kb on - strandat 1499.115 kb on + strandat 1499.115 kb on + strandat 1499.115 kb on + strandat 1499.116 kb on - strandat 1499.285 kb on + strandat 1499.285 kb on + strandat 1499.285 kb on + strandat 1499.285 kb on + strandat 1499.286 kb on - strandat 1499.286 kb on - strandat 1499.286 kb on - strandat 1499.286 kb on - strandat 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.338 kb on + strand, within ABZR86_RS06815at 1499.339 kb on - strand, within ABZR86_RS06815at 1499.339 kb on - strand, within ABZR86_RS06815at 1499.339 kb on - strand, within ABZR86_RS06815at 1499.339 kb on - strand, within ABZR86_RS06815at 1499.461 kb on + strand, within ABZR86_RS06815at 1499.461 kb on + strand, within ABZR86_RS06815at 1499.462 kb on - strand, within ABZR86_RS06815at 1499.462 kb on - strand, within ABZR86_RS06815at 1499.462 kb on - strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.499 kb on + strand, within ABZR86_RS06815at 1499.500 kb on - strand, within ABZR86_RS06815at 1499.500 kb on - strand, within ABZR86_RS06815at 1499.500 kb on - strand, within ABZR86_RS06815at 1499.788 kb on + strand, within ABZR86_RS06815at 1500.274 kb on + strand, within ABZR86_RS06815at 1500.274 kb on + strand, within ABZR86_RS06815at 1500.353 kb on + strand, within ABZR86_RS06815at 1500.353 kb on + strand, within ABZR86_RS06815at 1500.354 kb on - strand, within ABZR86_RS06815at 1500.530 kb on - strandat 1500.536 kb on + strandat 1500.536 kb on + strandat 1500.537 kb on - strandat 1500.537 kb on - strandat 1500.537 kb on - strandat 1500.539 kb on + strandat 1500.539 kb on + strandat 1500.539 kb on + strandat 1500.539 kb on + strandat 1500.539 kb on + strandat 1500.539 kb on + strandat 1500.539 kb on + strandat 1500.540 kb on - strandat 1500.540 kb on - strandat 1500.540 kb on - strandat 1500.546 kb on + strandat 1500.880 kb on + strandat 1500.880 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.914 kb on + strandat 1500.915 kb on - strandat 1500.915 kb on - strandat 1500.915 kb on - strandat 1500.915 kb on - strandat 1500.915 kb on - strandat 1500.915 kb on - strandat 1500.971 kb on + strandat 1500.971 kb on + strandat 1500.972 kb on - strandat 1500.972 kb on - strandat 1500.973 kb on + strandat 1500.973 kb on + strandat 1500.973 kb on + strandat 1500.973 kb on + strandat 1500.974 kb on - strandat 1500.974 kb on - strandat 1500.974 kb on - strandat 1500.977 kb on + strandat 1500.978 kb on - strandat 1500.978 kb on - strandat 1500.981 kb on + strandat 1500.982 kb on - strandat 1500.982 kb on - strandat 1501.115 kb on + strand, within ABZR86_RS06820at 1501.116 kb on - strand, within ABZR86_RS06820at 1501.116 kb on - strand, within ABZR86_RS06820at 1501.116 kb on - strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.131 kb on + strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.132 kb on - strand, within ABZR86_RS06820at 1501.316 kb on + strand, within ABZR86_RS06820at 1501.316 kb on + strand, within ABZR86_RS06820at 1501.316 kb on + strand, within ABZR86_RS06820at 1501.316 kb on + strand, within ABZR86_RS06820at 1501.316 kb on + strand, within ABZR86_RS06820at 1501.316 kb on + strand, within ABZR86_RS06820at 1501.317 kb on - strand, within ABZR86_RS06820at 1501.317 kb on - strand, within ABZR86_RS06820at 1501.360 kb on + strand, within ABZR86_RS06820at 1501.361 kb on - strand, within ABZR86_RS06820at 1501.361 kb on - strand, within ABZR86_RS06820at 1501.400 kb on - strand, within ABZR86_RS06820at 1501.475 kb on - strand, within ABZR86_RS06820

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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1,498,240 + ABZR86_RS06810 0.47 -0.4
1,498,240 + ABZR86_RS06810 0.47 +1.3
1,498,240 + ABZR86_RS06810 0.47 +0.8
1,498,300 + ABZR86_RS06810 0.51 +0.1
1,498,300 + ABZR86_RS06810 0.51 +0.9
1,498,300 + ABZR86_RS06810 0.51 -0.1
1,498,301 - ABZR86_RS06810 0.51 -0.1
1,498,301 - ABZR86_RS06810 0.51 +0.5
1,498,301 - ABZR86_RS06810 0.51 -0.6
1,498,301 - ABZR86_RS06810 0.51 -0.1
1,498,301 - ABZR86_RS06810 0.51 -0.7
1,498,301 - ABZR86_RS06810 0.51 +1.8
1,498,321 + ABZR86_RS06810 0.53 -0.3
1,498,321 + ABZR86_RS06810 0.53 +0.2
1,498,321 + ABZR86_RS06810 0.53 -0.4
1,498,321 + ABZR86_RS06810 0.53 -0.2
1,498,321 + ABZR86_RS06810 0.53 +0.4
1,498,321 + ABZR86_RS06810 0.53 -0.3
1,498,321 + ABZR86_RS06810 0.53 +1.0
1,498,322 - ABZR86_RS06810 0.53 +0.5
1,498,322 - ABZR86_RS06810 0.53 -2.5
1,498,322 - ABZR86_RS06810 0.53 -0.1
1,498,322 - ABZR86_RS06810 0.53 -0.3
1,498,322 - ABZR86_RS06810 0.53 -0.4
1,498,322 - ABZR86_RS06810 0.53 -0.2
1,498,322 - ABZR86_RS06810 0.53 -0.3
1,498,322 - ABZR86_RS06810 0.53 -0.6
1,498,322 - ABZR86_RS06810 0.53 +0.2
1,498,322 - ABZR86_RS06810 0.53 +0.1
1,498,322 - ABZR86_RS06810 0.53 -0.0
1,498,322 - ABZR86_RS06810 0.53 -1.0
1,498,542 + ABZR86_RS06810 0.68 +0.7
1,498,542 + ABZR86_RS06810 0.68 -0.6
1,498,542 + ABZR86_RS06810 0.68 -0.7
1,498,543 - ABZR86_RS06810 0.68 +0.1
1,498,621 + ABZR86_RS06810 0.73 +0.4
1,498,622 - ABZR86_RS06810 0.73 +0.2
1,499,035 + -0.6
1,499,035 + -0.2
1,499,035 + -0.5
1,499,035 + -0.9
1,499,036 - -0.5
1,499,036 - -0.5
1,499,036 - -0.7
1,499,036 - +0.9
1,499,036 - +0.4
1,499,115 + -0.7
1,499,115 + -1.4
1,499,115 + -0.5
1,499,116 - -0.1
1,499,285 + -0.4
1,499,285 + +0.2
1,499,285 + +0.2
1,499,285 + +0.3
1,499,286 - -0.1
1,499,286 - +0.9
1,499,286 - +0.4
1,499,286 - -0.6
1,499,338 + ABZR86_RS06815 0.12 -0.2
1,499,338 + ABZR86_RS06815 0.12 +0.4
1,499,338 + ABZR86_RS06815 0.12 -0.1
1,499,338 + ABZR86_RS06815 0.12 -1.6
1,499,338 + ABZR86_RS06815 0.12 -0.0
1,499,338 + ABZR86_RS06815 0.12 +0.9
1,499,338 + ABZR86_RS06815 0.12 -0.4
1,499,338 + ABZR86_RS06815 0.12 -0.9
1,499,338 + ABZR86_RS06815 0.12 -0.7
1,499,338 + ABZR86_RS06815 0.12 +0.0
1,499,339 - ABZR86_RS06815 0.12 +0.2
1,499,339 - ABZR86_RS06815 0.12 -0.6
1,499,339 - ABZR86_RS06815 0.12 +0.0
1,499,339 - ABZR86_RS06815 0.12 -0.6
1,499,461 + ABZR86_RS06815 0.21 +0.0
1,499,461 + ABZR86_RS06815 0.21 +0.4
1,499,462 - ABZR86_RS06815 0.21 -0.0
1,499,462 - ABZR86_RS06815 0.21 -0.3
1,499,462 - ABZR86_RS06815 0.21 +0.3
1,499,499 + ABZR86_RS06815 0.23 +0.1
1,499,499 + ABZR86_RS06815 0.23 +0.1
1,499,499 + ABZR86_RS06815 0.23 -0.3
1,499,499 + ABZR86_RS06815 0.23 +0.7
1,499,499 + ABZR86_RS06815 0.23 -0.1
1,499,499 + ABZR86_RS06815 0.23 +0.2
1,499,499 + ABZR86_RS06815 0.23 -0.6
1,499,499 + ABZR86_RS06815 0.23 +0.2
1,499,500 - ABZR86_RS06815 0.24 +0.4
1,499,500 - ABZR86_RS06815 0.24 -0.6
1,499,500 - ABZR86_RS06815 0.24 -0.3
1,499,788 + ABZR86_RS06815 0.45 -0.0
1,500,274 + ABZR86_RS06815 0.81 -1.1
1,500,274 + ABZR86_RS06815 0.81 -0.4
1,500,353 + ABZR86_RS06815 0.87 +1.2
1,500,353 + ABZR86_RS06815 0.87 -0.1
1,500,354 - ABZR86_RS06815 0.87 +0.4
1,500,530 - +0.3
1,500,536 + +0.1
1,500,536 + -0.2
1,500,537 - -0.4
1,500,537 - +0.5
1,500,537 - +1.3
1,500,539 + +0.2
1,500,539 + +0.1
1,500,539 + +0.1
1,500,539 + +0.3
1,500,539 + -1.6
1,500,539 + +0.2
1,500,539 + -0.2
1,500,540 - -0.0
1,500,540 - +0.0
1,500,540 - -0.3
1,500,546 + -0.2
1,500,880 + -0.1
1,500,880 + +0.9
1,500,914 + +0.1
1,500,914 + -0.1
1,500,914 + +0.1
1,500,914 + -0.3
1,500,914 + +0.3
1,500,914 + -0.2
1,500,914 + -0.2
1,500,914 + -0.3
1,500,915 - -0.2
1,500,915 - +0.6
1,500,915 - +0.4
1,500,915 - +0.9
1,500,915 - -1.0
1,500,915 - -0.7
1,500,971 + -0.3
1,500,971 + -0.3
1,500,972 - +0.2
1,500,972 - -2.3
1,500,973 + +0.2
1,500,973 + -0.5
1,500,973 + -0.0
1,500,973 + -0.5
1,500,974 - +0.8
1,500,974 - +0.3
1,500,974 - +1.1
1,500,977 + -0.6
1,500,978 - -0.1
1,500,978 - +0.0
1,500,981 + +0.6
1,500,982 - +0.1
1,500,982 - -2.6
1,501,115 + ABZR86_RS06820 0.10 -0.1
1,501,116 - ABZR86_RS06820 0.10 +0.4
1,501,116 - ABZR86_RS06820 0.10 -0.7
1,501,116 - ABZR86_RS06820 0.10 +0.4
1,501,131 + ABZR86_RS06820 0.11 +1.5
1,501,131 + ABZR86_RS06820 0.11 +0.7
1,501,131 + ABZR86_RS06820 0.11 -0.2
1,501,131 + ABZR86_RS06820 0.11 -0.5
1,501,131 + ABZR86_RS06820 0.11 -0.4
1,501,131 + ABZR86_RS06820 0.11 +0.3
1,501,131 + ABZR86_RS06820 0.11 +0.2
1,501,131 + ABZR86_RS06820 0.11 +0.6
1,501,131 + ABZR86_RS06820 0.11 -0.7
1,501,131 + ABZR86_RS06820 0.11 -0.4
1,501,131 + ABZR86_RS06820 0.11 -0.4
1,501,131 + ABZR86_RS06820 0.11 -0.9
1,501,131 + ABZR86_RS06820 0.11 +0.3
1,501,131 + ABZR86_RS06820 0.11 -0.2
1,501,131 + ABZR86_RS06820 0.11 -0.2
1,501,131 + ABZR86_RS06820 0.11 -0.3
1,501,131 + ABZR86_RS06820 0.11 +0.7
1,501,131 + ABZR86_RS06820 0.11 +0.5
1,501,132 - ABZR86_RS06820 0.11 -1.7
1,501,132 - ABZR86_RS06820 0.11 +0.2
1,501,132 - ABZR86_RS06820 0.11 -0.1
1,501,132 - ABZR86_RS06820 0.11 +0.3
1,501,132 - ABZR86_RS06820 0.11 -0.6
1,501,132 - ABZR86_RS06820 0.11 +0.2
1,501,132 - ABZR86_RS06820 0.11 +0.2
1,501,316 + ABZR86_RS06820 0.22 +0.5
1,501,316 + ABZR86_RS06820 0.22 -0.6
1,501,316 + ABZR86_RS06820 0.22 -0.0
1,501,316 + ABZR86_RS06820 0.22 -0.5
1,501,316 + ABZR86_RS06820 0.22 -0.4
1,501,316 + ABZR86_RS06820 0.22 -0.1
1,501,317 - ABZR86_RS06820 0.22 +0.2
1,501,317 - ABZR86_RS06820 0.22 +0.8
1,501,360 + ABZR86_RS06820 0.25 -1.4
1,501,361 - ABZR86_RS06820 0.25 +0.3
1,501,361 - ABZR86_RS06820 0.25 -0.6
1,501,400 - ABZR86_RS06820 0.28 +0.3
1,501,475 - ABZR86_RS06820 0.32 +1.9

Or see this region's nucleotide sequence