Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05290 and ABZR86_RS05295 are separated by 107 nucleotides ABZR86_RS05295 and ABZR86_RS05300 are separated by 227 nucleotides
ABZR86_RS05290: ABZR86_RS05290 - TonB-dependent receptor, at 1,190,142 to 1,192,871
_RS05290
ABZR86_RS05295: ABZR86_RS05295 - glucokinase, at 1,192,979 to 1,194,046
_RS05295
ABZR86_RS05300: ABZR86_RS05300 - class I SAM-dependent methyltransferase, at 1,194,274 to 1,195,164
_RS05300
Position (kb)
1192
1193
1194
1195 Strain fitness (log2 ratio)
-1
0
1 at 1192.010 kb on - strand, within ABZR86_RS05290 at 1192.222 kb on + strand, within ABZR86_RS05290 at 1192.222 kb on + strand, within ABZR86_RS05290 at 1192.223 kb on - strand, within ABZR86_RS05290 at 1192.223 kb on - strand, within ABZR86_RS05290 at 1192.250 kb on + strand, within ABZR86_RS05290 at 1192.251 kb on - strand, within ABZR86_RS05290 at 1192.280 kb on + strand, within ABZR86_RS05290 at 1192.280 kb on + strand, within ABZR86_RS05290 at 1192.296 kb on - strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.339 kb on + strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.340 kb on - strand, within ABZR86_RS05290 at 1192.341 kb on + strand, within ABZR86_RS05290 at 1192.342 kb on - strand, within ABZR86_RS05290 at 1192.381 kb on + strand, within ABZR86_RS05290 at 1192.382 kb on - strand, within ABZR86_RS05290 at 1192.382 kb on - strand, within ABZR86_RS05290 at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.946 kb on + strand at 1192.947 kb on - strand at 1192.947 kb on - strand at 1192.947 kb on - strand at 1193.009 kb on - strand at 1193.178 kb on + strand, within ABZR86_RS05295 at 1193.178 kb on + strand, within ABZR86_RS05295 at 1193.178 kb on + strand, within ABZR86_RS05295 at 1193.178 kb on + strand, within ABZR86_RS05295 at 1193.334 kb on + strand, within ABZR86_RS05295 at 1193.335 kb on - strand, within ABZR86_RS05295 at 1193.355 kb on + strand, within ABZR86_RS05295 at 1193.355 kb on + strand, within ABZR86_RS05295 at 1193.356 kb on - strand, within ABZR86_RS05295 at 1193.356 kb on - strand, within ABZR86_RS05295 at 1193.394 kb on + strand, within ABZR86_RS05295 at 1193.395 kb on - strand, within ABZR86_RS05295 at 1193.625 kb on + strand, within ABZR86_RS05295 at 1193.625 kb on + strand, within ABZR86_RS05295 at 1193.625 kb on + strand, within ABZR86_RS05295 at 1193.626 kb on - strand, within ABZR86_RS05295 at 1193.936 kb on - strand, within ABZR86_RS05295 at 1194.148 kb on + strand at 1194.149 kb on - strand at 1194.193 kb on + strand at 1194.193 kb on + strand at 1194.193 kb on + strand at 1194.194 kb on - strand at 1194.439 kb on + strand, within ABZR86_RS05300 at 1194.496 kb on + strand, within ABZR86_RS05300 at 1194.496 kb on + strand, within ABZR86_RS05300 at 1194.530 kb on - strand, within ABZR86_RS05300 at 1194.884 kb on + strand, within ABZR86_RS05300 at 1194.885 kb on - strand, within ABZR86_RS05300 at 1194.885 kb on - strand, within ABZR86_RS05300 at 1194.937 kb on + strand, within ABZR86_RS05300 at 1194.938 kb on - strand, within ABZR86_RS05300 at 1194.958 kb on + strand, within ABZR86_RS05300 at 1194.959 kb on - strand, within ABZR86_RS05300
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,192,010 - ABZR86_RS05290 0.68 +0.1 1,192,222 + ABZR86_RS05290 0.76 +0.2 1,192,222 + ABZR86_RS05290 0.76 -0.1 1,192,223 - ABZR86_RS05290 0.76 +0.9 1,192,223 - ABZR86_RS05290 0.76 +0.6 1,192,250 + ABZR86_RS05290 0.77 +0.7 1,192,251 - ABZR86_RS05290 0.77 +0.3 1,192,280 + ABZR86_RS05290 0.78 -0.5 1,192,280 + ABZR86_RS05290 0.78 +0.6 1,192,296 - ABZR86_RS05290 0.79 -0.8 1,192,339 + ABZR86_RS05290 0.80 -0.4 1,192,339 + ABZR86_RS05290 0.80 +0.8 1,192,339 + ABZR86_RS05290 0.80 +0.2 1,192,339 + ABZR86_RS05290 0.80 +0.8 1,192,339 + ABZR86_RS05290 0.80 -0.5 1,192,339 + ABZR86_RS05290 0.80 +0.2 1,192,339 + ABZR86_RS05290 0.80 -0.3 1,192,340 - ABZR86_RS05290 0.81 -0.8 1,192,340 - ABZR86_RS05290 0.81 +0.1 1,192,340 - ABZR86_RS05290 0.81 -0.8 1,192,340 - ABZR86_RS05290 0.81 -0.1 1,192,340 - ABZR86_RS05290 0.81 +0.2 1,192,340 - ABZR86_RS05290 0.81 -0.2 1,192,340 - ABZR86_RS05290 0.81 +0.1 1,192,340 - ABZR86_RS05290 0.81 -0.1 1,192,341 + ABZR86_RS05290 0.81 -0.7 1,192,342 - ABZR86_RS05290 0.81 -0.2 1,192,381 + ABZR86_RS05290 0.82 -1.0 1,192,382 - ABZR86_RS05290 0.82 -0.6 1,192,382 - ABZR86_RS05290 0.82 -0.1 1,192,946 + +0.2 1,192,946 + -1.5 1,192,946 + +0.5 1,192,946 + -0.2 1,192,946 + +0.6 1,192,946 + -0.1 1,192,946 + -0.1 1,192,946 + +0.3 1,192,946 + -0.0 1,192,946 + +0.1 1,192,946 + -0.6 1,192,947 - -0.3 1,192,947 - +0.3 1,192,947 - +1.0 1,193,009 - +0.1 1,193,178 + ABZR86_RS05295 0.19 -0.2 1,193,178 + ABZR86_RS05295 0.19 +0.7 1,193,178 + ABZR86_RS05295 0.19 +0.2 1,193,178 + ABZR86_RS05295 0.19 -0.5 1,193,334 + ABZR86_RS05295 0.33 -0.3 1,193,335 - ABZR86_RS05295 0.33 +0.5 1,193,355 + ABZR86_RS05295 0.35 +0.6 1,193,355 + ABZR86_RS05295 0.35 -0.9 1,193,356 - ABZR86_RS05295 0.35 -0.2 1,193,356 - ABZR86_RS05295 0.35 +0.1 1,193,394 + ABZR86_RS05295 0.39 +0.8 1,193,395 - ABZR86_RS05295 0.39 +0.3 1,193,625 + ABZR86_RS05295 0.60 -0.5 1,193,625 + ABZR86_RS05295 0.60 -0.1 1,193,625 + ABZR86_RS05295 0.60 +0.3 1,193,626 - ABZR86_RS05295 0.61 -0.4 1,193,936 - ABZR86_RS05295 0.90 -0.2 1,194,148 + -0.5 1,194,149 - +0.1 1,194,193 + -0.5 1,194,193 + -0.1 1,194,193 + +1.6 1,194,194 - -0.6 1,194,439 + ABZR86_RS05300 0.19 +0.6 1,194,496 + ABZR86_RS05300 0.25 +0.2 1,194,496 + ABZR86_RS05300 0.25 +0.1 1,194,530 - ABZR86_RS05300 0.29 -0.7 1,194,884 + ABZR86_RS05300 0.68 -0.1 1,194,885 - ABZR86_RS05300 0.69 +0.1 1,194,885 - ABZR86_RS05300 0.69 -0.9 1,194,937 + ABZR86_RS05300 0.74 +0.6 1,194,938 - ABZR86_RS05300 0.75 +1.0 1,194,958 + ABZR86_RS05300 0.77 -0.2 1,194,959 - ABZR86_RS05300 0.77 +0.7
Or see this region's nucleotide sequence