Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04620 and ABZR86_RS04625 are separated by 254 nucleotides ABZR86_RS04625 and ABZR86_RS04630 are separated by 154 nucleotides ABZR86_RS04630 and ABZR86_RS04635 are separated by 17 nucleotides
ABZR86_RS04620: ABZR86_RS04620 - PAS domain-containing sensor histidine kinase, at 1,034,602 to 1,036,485
_RS04620
ABZR86_RS04625: ABZR86_RS04625 - hypothetical protein, at 1,036,740 to 1,037,093
_RS04625
ABZR86_RS04630: ABZR86_RS04630 - DUF535 family protein, at 1,037,248 to 1,038,267
_RS04630
ABZR86_RS04635: ABZR86_RS04635 - TonB-dependent receptor, at 1,038,285 to 1,040,693
_RS04635
Position (kb)
1037
1038
1039 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.457 kb on + strand at 1036.458 kb on - strand at 1036.458 kb on - strand at 1036.458 kb on - strand at 1036.466 kb on + strand at 1036.466 kb on + strand at 1036.512 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.566 kb on + strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.567 kb on - strand at 1036.570 kb on + strand at 1036.570 kb on + strand at 1036.571 kb on - strand at 1036.658 kb on + strand at 1036.658 kb on + strand at 1036.658 kb on + strand at 1036.658 kb on + strand at 1036.658 kb on + strand at 1036.658 kb on + strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.659 kb on - strand at 1036.689 kb on + strand at 1036.689 kb on + strand at 1036.689 kb on + strand at 1036.689 kb on + strand at 1036.689 kb on + strand at 1036.690 kb on - strand at 1036.690 kb on - strand at 1036.690 kb on - strand at 1036.690 kb on - strand at 1036.690 kb on - strand at 1036.825 kb on - strand, within ABZR86_RS04625 at 1036.863 kb on + strand, within ABZR86_RS04625 at 1036.863 kb on + strand, within ABZR86_RS04625 at 1036.863 kb on + strand, within ABZR86_RS04625 at 1036.863 kb on + strand, within ABZR86_RS04625 at 1036.864 kb on - strand, within ABZR86_RS04625 at 1036.864 kb on - strand, within ABZR86_RS04625 at 1036.914 kb on + strand, within ABZR86_RS04625 at 1036.915 kb on - strand, within ABZR86_RS04625 at 1036.915 kb on - strand, within ABZR86_RS04625 at 1036.915 kb on - strand, within ABZR86_RS04625 at 1036.915 kb on - strand, within ABZR86_RS04625 at 1037.399 kb on - strand, within ABZR86_RS04630 at 1037.504 kb on - strand, within ABZR86_RS04630 at 1037.519 kb on + strand, within ABZR86_RS04630 at 1037.519 kb on + strand, within ABZR86_RS04630 at 1037.519 kb on + strand, within ABZR86_RS04630 at 1037.519 kb on + strand, within ABZR86_RS04630 at 1037.520 kb on - strand, within ABZR86_RS04630 at 1037.520 kb on - strand, within ABZR86_RS04630 at 1037.520 kb on - strand, within ABZR86_RS04630 at 1037.734 kb on + strand, within ABZR86_RS04630 at 1037.734 kb on + strand, within ABZR86_RS04630 at 1037.734 kb on + strand, within ABZR86_RS04630 at 1037.734 kb on + strand, within ABZR86_RS04630 at 1037.735 kb on - strand, within ABZR86_RS04630 at 1037.735 kb on - strand, within ABZR86_RS04630 at 1037.932 kb on + strand, within ABZR86_RS04630 at 1037.932 kb on + strand, within ABZR86_RS04630 at 1037.932 kb on + strand, within ABZR86_RS04630 at 1037.933 kb on - strand, within ABZR86_RS04630 at 1037.933 kb on - strand, within ABZR86_RS04630 at 1038.001 kb on + strand, within ABZR86_RS04630 at 1038.001 kb on + strand, within ABZR86_RS04630 at 1038.002 kb on - strand, within ABZR86_RS04630 at 1038.052 kb on + strand, within ABZR86_RS04630 at 1038.052 kb on + strand, within ABZR86_RS04630 at 1038.052 kb on + strand, within ABZR86_RS04630 at 1038.053 kb on - strand, within ABZR86_RS04630 at 1038.053 kb on - strand, within ABZR86_RS04630 at 1038.053 kb on - strand, within ABZR86_RS04630 at 1038.053 kb on - strand, within ABZR86_RS04630 at 1038.266 kb on - strand at 1038.266 kb on - strand at 1038.295 kb on + strand at 1038.296 kb on - strand at 1038.296 kb on - strand at 1038.296 kb on - strand at 1038.296 kb on - strand at 1038.296 kb on - strand at 1038.364 kb on + strand at 1038.364 kb on + strand at 1038.365 kb on - strand at 1038.365 kb on - strand at 1038.421 kb on + strand at 1038.421 kb on + strand at 1038.421 kb on + strand at 1038.422 kb on - strand at 1038.422 kb on - strand at 1038.424 kb on + strand at 1038.424 kb on + strand at 1038.424 kb on + strand at 1038.424 kb on + strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.425 kb on - strand at 1038.470 kb on - strand at 1038.470 kb on - strand at 1038.563 kb on - strand, within ABZR86_RS04635 at 1038.643 kb on + strand, within ABZR86_RS04635 at 1038.643 kb on + strand, within ABZR86_RS04635 at 1038.643 kb on + strand, within ABZR86_RS04635 at 1038.644 kb on - strand, within ABZR86_RS04635 at 1038.644 kb on - strand, within ABZR86_RS04635 at 1038.736 kb on + strand, within ABZR86_RS04635 at 1038.737 kb on - strand, within ABZR86_RS04635 at 1038.737 kb on - strand, within ABZR86_RS04635 at 1038.757 kb on + strand, within ABZR86_RS04635 at 1038.757 kb on + strand, within ABZR86_RS04635 at 1038.757 kb on + strand, within ABZR86_RS04635 at 1038.757 kb on + strand, within ABZR86_RS04635 at 1038.758 kb on - strand, within ABZR86_RS04635 at 1038.758 kb on - strand, within ABZR86_RS04635 at 1038.758 kb on - strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.931 kb on + strand, within ABZR86_RS04635 at 1038.932 kb on - strand, within ABZR86_RS04635 at 1038.932 kb on - strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.039 kb on + strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.040 kb on - strand, within ABZR86_RS04635 at 1039.213 kb on + strand, within ABZR86_RS04635 at 1039.213 kb on + strand, within ABZR86_RS04635 at 1039.213 kb on + strand, within ABZR86_RS04635 at 1039.213 kb on + strand, within ABZR86_RS04635 at 1039.214 kb on - strand, within ABZR86_RS04635 at 1039.214 kb on - strand, within ABZR86_RS04635
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,036,457 + -0.1 1,036,457 + -0.8 1,036,457 + +0.1 1,036,457 + -0.3 1,036,457 + -0.9 1,036,457 + -0.2 1,036,457 + -0.2 1,036,457 + +0.7 1,036,457 + +0.8 1,036,457 + -0.2 1,036,457 + -0.5 1,036,457 + -0.9 1,036,457 + -0.9 1,036,458 - -0.1 1,036,458 - +0.4 1,036,458 - -0.7 1,036,466 + -0.5 1,036,466 + -1.0 1,036,512 + +0.1 1,036,566 + -0.3 1,036,566 + -0.6 1,036,566 + +0.4 1,036,566 + -0.3 1,036,566 + +0.3 1,036,566 + -0.3 1,036,566 + +0.6 1,036,566 + -0.7 1,036,566 + -0.6 1,036,566 + +0.2 1,036,566 + -0.4 1,036,566 + +0.1 1,036,567 - -0.9 1,036,567 - +2.0 1,036,567 - -1.6 1,036,567 - -0.2 1,036,567 - +0.0 1,036,567 - -0.3 1,036,567 - +0.2 1,036,567 - -0.8 1,036,570 + -0.2 1,036,570 + +0.0 1,036,571 - -0.1 1,036,658 + +0.4 1,036,658 + -0.6 1,036,658 + +0.6 1,036,658 + -0.1 1,036,658 + -0.1 1,036,658 + -0.8 1,036,659 - -0.1 1,036,659 - -1.9 1,036,659 - +0.1 1,036,659 - +0.8 1,036,659 - -0.8 1,036,659 - +0.8 1,036,659 - -0.1 1,036,659 - +0.5 1,036,659 - +0.4 1,036,659 - +0.4 1,036,689 + +0.5 1,036,689 + -0.4 1,036,689 + +0.0 1,036,689 + +0.3 1,036,689 + -2.0 1,036,690 - +0.2 1,036,690 - +0.6 1,036,690 - -0.9 1,036,690 - -0.2 1,036,690 - -1.1 1,036,825 - ABZR86_RS04625 0.24 +1.3 1,036,863 + ABZR86_RS04625 0.35 +0.5 1,036,863 + ABZR86_RS04625 0.35 -0.1 1,036,863 + ABZR86_RS04625 0.35 +0.1 1,036,863 + ABZR86_RS04625 0.35 +0.0 1,036,864 - ABZR86_RS04625 0.35 -1.1 1,036,864 - ABZR86_RS04625 0.35 +0.4 1,036,914 + ABZR86_RS04625 0.49 +0.3 1,036,915 - ABZR86_RS04625 0.49 +0.5 1,036,915 - ABZR86_RS04625 0.49 +0.2 1,036,915 - ABZR86_RS04625 0.49 -0.1 1,036,915 - ABZR86_RS04625 0.49 +0.7 1,037,399 - ABZR86_RS04630 0.15 +0.1 1,037,504 - ABZR86_RS04630 0.25 +0.1 1,037,519 + ABZR86_RS04630 0.27 +0.2 1,037,519 + ABZR86_RS04630 0.27 -0.7 1,037,519 + ABZR86_RS04630 0.27 +0.9 1,037,519 + ABZR86_RS04630 0.27 +1.0 1,037,520 - ABZR86_RS04630 0.27 -0.0 1,037,520 - ABZR86_RS04630 0.27 +0.6 1,037,520 - ABZR86_RS04630 0.27 +0.0 1,037,734 + ABZR86_RS04630 0.48 -0.4 1,037,734 + ABZR86_RS04630 0.48 +0.9 1,037,734 + ABZR86_RS04630 0.48 +0.5 1,037,734 + ABZR86_RS04630 0.48 -0.5 1,037,735 - ABZR86_RS04630 0.48 -0.0 1,037,735 - ABZR86_RS04630 0.48 +0.7 1,037,932 + ABZR86_RS04630 0.67 +0.8 1,037,932 + ABZR86_RS04630 0.67 -0.1 1,037,932 + ABZR86_RS04630 0.67 +0.4 1,037,933 - ABZR86_RS04630 0.67 +0.6 1,037,933 - ABZR86_RS04630 0.67 +0.5 1,038,001 + ABZR86_RS04630 0.74 +0.2 1,038,001 + ABZR86_RS04630 0.74 -0.8 1,038,002 - ABZR86_RS04630 0.74 +0.2 1,038,052 + ABZR86_RS04630 0.79 +0.7 1,038,052 + ABZR86_RS04630 0.79 -0.7 1,038,052 + ABZR86_RS04630 0.79 +0.5 1,038,053 - ABZR86_RS04630 0.79 +0.6 1,038,053 - ABZR86_RS04630 0.79 +1.3 1,038,053 - ABZR86_RS04630 0.79 +0.4 1,038,053 - ABZR86_RS04630 0.79 +0.4 1,038,266 - +0.0 1,038,266 - -0.5 1,038,295 + -0.3 1,038,296 - -0.5 1,038,296 - -0.0 1,038,296 - -0.7 1,038,296 - -0.2 1,038,296 - -0.3 1,038,364 + -0.1 1,038,364 + -1.4 1,038,365 - -0.8 1,038,365 - +0.1 1,038,421 + -0.4 1,038,421 + +0.3 1,038,421 + -0.2 1,038,422 - +0.8 1,038,422 - +0.1 1,038,424 + +0.5 1,038,424 + -0.4 1,038,424 + -0.0 1,038,424 + -0.0 1,038,425 - +0.0 1,038,425 - -0.6 1,038,425 - +0.2 1,038,425 - +0.2 1,038,425 - -0.1 1,038,425 - +1.3 1,038,425 - -1.0 1,038,425 - +0.2 1,038,470 - +0.2 1,038,470 - -0.8 1,038,563 - ABZR86_RS04635 0.12 +0.5 1,038,643 + ABZR86_RS04635 0.15 +0.1 1,038,643 + ABZR86_RS04635 0.15 -0.0 1,038,643 + ABZR86_RS04635 0.15 +0.0 1,038,644 - ABZR86_RS04635 0.15 -1.3 1,038,644 - ABZR86_RS04635 0.15 -0.3 1,038,736 + ABZR86_RS04635 0.19 -0.3 1,038,737 - ABZR86_RS04635 0.19 +0.3 1,038,737 - ABZR86_RS04635 0.19 -0.8 1,038,757 + ABZR86_RS04635 0.20 -1.0 1,038,757 + ABZR86_RS04635 0.20 -1.0 1,038,757 + ABZR86_RS04635 0.20 +0.3 1,038,757 + ABZR86_RS04635 0.20 +0.1 1,038,758 - ABZR86_RS04635 0.20 +0.1 1,038,758 - ABZR86_RS04635 0.20 -0.1 1,038,758 - ABZR86_RS04635 0.20 -2.4 1,038,931 + ABZR86_RS04635 0.27 +0.4 1,038,931 + ABZR86_RS04635 0.27 +1.0 1,038,931 + ABZR86_RS04635 0.27 -0.6 1,038,931 + ABZR86_RS04635 0.27 -0.3 1,038,931 + ABZR86_RS04635 0.27 -1.8 1,038,931 + ABZR86_RS04635 0.27 +0.5 1,038,931 + ABZR86_RS04635 0.27 -0.9 1,038,932 - ABZR86_RS04635 0.27 -0.2 1,038,932 - ABZR86_RS04635 0.27 -0.7 1,039,039 + ABZR86_RS04635 0.31 +0.7 1,039,039 + ABZR86_RS04635 0.31 +0.1 1,039,039 + ABZR86_RS04635 0.31 +0.3 1,039,039 + ABZR86_RS04635 0.31 +0.1 1,039,039 + ABZR86_RS04635 0.31 +0.3 1,039,039 + ABZR86_RS04635 0.31 +0.3 1,039,039 + ABZR86_RS04635 0.31 -0.9 1,039,039 + ABZR86_RS04635 0.31 +0.2 1,039,040 - ABZR86_RS04635 0.31 +0.4 1,039,040 - ABZR86_RS04635 0.31 +0.2 1,039,040 - ABZR86_RS04635 0.31 -0.2 1,039,040 - ABZR86_RS04635 0.31 +0.1 1,039,040 - ABZR86_RS04635 0.31 +0.9 1,039,040 - ABZR86_RS04635 0.31 +0.1 1,039,040 - ABZR86_RS04635 0.31 +0.1 1,039,213 + ABZR86_RS04635 0.39 -0.7 1,039,213 + ABZR86_RS04635 0.39 -0.8 1,039,213 + ABZR86_RS04635 0.39 +0.4 1,039,213 + ABZR86_RS04635 0.39 -0.8 1,039,214 - ABZR86_RS04635 0.39 +0.4 1,039,214 - ABZR86_RS04635 0.39 +0.2
Or see this region's nucleotide sequence