Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02815 and ABZR86_RS02820 are separated by 123 nucleotides ABZR86_RS02820 and ABZR86_RS02825 are separated by 42 nucleotides ABZR86_RS02825 and ABZR86_RS02830 are separated by 59 nucleotides
ABZR86_RS02815: ABZR86_RS02815 - asparagine synthase B, at 568,238 to 569,917
_RS02815
ABZR86_RS02820: ABZR86_RS02820 - peptide chain release factor 2, at 570,041 to 571,166
_RS02820
ABZR86_RS02825: ABZR86_RS02825 - hypothetical protein, at 571,209 to 571,631
_RS02825
ABZR86_RS02830: ABZR86_RS02830 - hypothetical protein, at 571,691 to 572,806
_RS02830
Position (kb) 570
571
572 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.150 kb on + strand, within ABZR86_RS02815 at 569.151 kb on - strand, within ABZR86_RS02815 at 569.151 kb on - strand, within ABZR86_RS02815 at 569.197 kb on + strand, within ABZR86_RS02815 at 569.207 kb on + strand, within ABZR86_RS02815 at 569.207 kb on + strand, within ABZR86_RS02815 at 569.207 kb on + strand, within ABZR86_RS02815 at 569.208 kb on - strand, within ABZR86_RS02815 at 569.330 kb on + strand, within ABZR86_RS02815 at 569.330 kb on + strand, within ABZR86_RS02815 at 569.330 kb on + strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.331 kb on - strand, within ABZR86_RS02815 at 569.338 kb on + strand, within ABZR86_RS02815 at 569.339 kb on - strand, within ABZR86_RS02815 at 569.510 kb on + strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.511 kb on - strand, within ABZR86_RS02815 at 569.627 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.738 kb on + strand, within ABZR86_RS02815 at 569.739 kb on - strand, within ABZR86_RS02815 at 569.744 kb on + strand, within ABZR86_RS02815 at 569.915 kb on + strand at 569.915 kb on + strand at 569.916 kb on - strand at 569.982 kb on + strand at 569.982 kb on + strand at 569.983 kb on - strand at 569.983 kb on - strand at 569.983 kb on - strand at 570.005 kb on + strand at 570.032 kb on + strand at 570.032 kb on + strand at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.898 kb on + strand, within ABZR86_RS02830 at 571.898 kb on + strand, within ABZR86_RS02830 at 571.919 kb on + strand, within ABZR86_RS02830 at 571.990 kb on + strand, within ABZR86_RS02830
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 569,150 + ABZR86_RS02815 0.54 -3.2 569,150 + ABZR86_RS02815 0.54 -3.6 569,150 + ABZR86_RS02815 0.54 -4.0 569,150 + ABZR86_RS02815 0.54 -2.6 569,151 - ABZR86_RS02815 0.54 -3.6 569,151 - ABZR86_RS02815 0.54 -0.8 569,197 + ABZR86_RS02815 0.57 -2.8 569,207 + ABZR86_RS02815 0.58 -3.6 569,207 + ABZR86_RS02815 0.58 -4.9 569,207 + ABZR86_RS02815 0.58 -2.4 569,208 - ABZR86_RS02815 0.58 -4.3 569,330 + ABZR86_RS02815 0.65 -2.7 569,330 + ABZR86_RS02815 0.65 -4.5 569,330 + ABZR86_RS02815 0.65 -2.4 569,331 - ABZR86_RS02815 0.65 -4.4 569,331 - ABZR86_RS02815 0.65 -1.1 569,331 - ABZR86_RS02815 0.65 -3.1 569,331 - ABZR86_RS02815 0.65 -2.5 569,331 - ABZR86_RS02815 0.65 -2.7 569,331 - ABZR86_RS02815 0.65 -1.2 569,338 + ABZR86_RS02815 0.65 -0.8 569,339 - ABZR86_RS02815 0.66 -0.5 569,510 + ABZR86_RS02815 0.76 -2.3 569,511 - ABZR86_RS02815 0.76 -4.1 569,511 - ABZR86_RS02815 0.76 -4.1 569,511 - ABZR86_RS02815 0.76 -1.0 569,511 - ABZR86_RS02815 0.76 -3.4 569,627 + ABZR86_RS02815 0.83 -3.5 569,738 + ABZR86_RS02815 0.89 -3.8 569,738 + ABZR86_RS02815 0.89 -3.5 569,738 + ABZR86_RS02815 0.89 -2.9 569,738 + ABZR86_RS02815 0.89 -2.5 569,739 - ABZR86_RS02815 0.89 -3.5 569,744 + ABZR86_RS02815 0.90 -3.1 569,915 + +0.1 569,915 + -0.4 569,916 - +0.2 569,982 + -0.6 569,982 + -0.6 569,983 - +0.8 569,983 - -0.2 569,983 - -0.3 570,005 + -0.3 570,032 + -0.0 570,032 + -0.0 571,838 + ABZR86_RS02830 0.13 -0.3 571,838 + ABZR86_RS02830 0.13 +0.1 571,838 + ABZR86_RS02830 0.13 +0.0 571,838 + ABZR86_RS02830 0.13 -0.5 571,838 + ABZR86_RS02830 0.13 +0.1 571,853 + ABZR86_RS02830 0.15 -0.5 571,853 + ABZR86_RS02830 0.15 -0.4 571,853 + ABZR86_RS02830 0.15 -0.3 571,853 + ABZR86_RS02830 0.15 -1.4 571,898 + ABZR86_RS02830 0.19 +0.0 571,898 + ABZR86_RS02830 0.19 +0.4 571,919 + ABZR86_RS02830 0.20 +1.4 571,990 + ABZR86_RS02830 0.27 +0.1
Or see this region's nucleotide sequence