Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01400 and ABZR86_RS01405 are separated by 87 nucleotides ABZR86_RS01405 and ABZR86_RS01410 overlap by 1 nucleotides ABZR86_RS01410 and ABZR86_RS01415 are separated by 365 nucleotides
ABZR86_RS01400: ABZR86_RS01400 - Lrp/AsnC family transcriptional regulator, at 301,352 to 301,825
_RS01400
ABZR86_RS01405: ABZR86_RS01405 - helix-turn-helix domain-containing protein, at 301,913 to 302,569
_RS01405
ABZR86_RS01410: ABZR86_RS01410 - hypothetical protein, at 302,569 to 303,219
_RS01410
ABZR86_RS01415: ABZR86_RS01415 - histidine kinase, at 303,585 to 304,829
_RS01415
Position (kb) 302
303
304 Strain fitness (log2 ratio) -2
-1
0
1 at 301.682 kb on + strand, within ABZR86_RS01400 at 301.682 kb on + strand, within ABZR86_RS01400 at 301.682 kb on + strand, within ABZR86_RS01400 at 301.682 kb on + strand, within ABZR86_RS01400 at 301.683 kb on - strand, within ABZR86_RS01400 at 301.700 kb on + strand, within ABZR86_RS01400 at 301.700 kb on + strand, within ABZR86_RS01400 at 301.701 kb on - strand, within ABZR86_RS01400 at 301.792 kb on + strand at 301.792 kb on + strand at 301.824 kb on - strand at 301.824 kb on - strand at 301.824 kb on - strand at 301.824 kb on - strand at 301.824 kb on - strand at 301.877 kb on - strand at 301.924 kb on + strand at 301.924 kb on + strand at 301.949 kb on + strand at 301.949 kb on + strand at 301.949 kb on + strand at 301.950 kb on - strand at 302.028 kb on + strand, within ABZR86_RS01405 at 302.029 kb on - strand, within ABZR86_RS01405 at 302.048 kb on + strand, within ABZR86_RS01405 at 302.049 kb on - strand, within ABZR86_RS01405 at 302.049 kb on - strand, within ABZR86_RS01405 at 302.049 kb on - strand, within ABZR86_RS01405 at 302.049 kb on - strand, within ABZR86_RS01405 at 302.049 kb on - strand, within ABZR86_RS01405 at 302.049 kb on - strand, within ABZR86_RS01405 at 302.171 kb on - strand, within ABZR86_RS01405 at 302.171 kb on - strand, within ABZR86_RS01405 at 302.171 kb on - strand, within ABZR86_RS01405 at 302.319 kb on + strand, within ABZR86_RS01405 at 302.320 kb on - strand, within ABZR86_RS01405 at 302.320 kb on - strand, within ABZR86_RS01405 at 302.320 kb on - strand, within ABZR86_RS01405 at 302.354 kb on - strand, within ABZR86_RS01405 at 302.878 kb on + strand, within ABZR86_RS01410 at 302.879 kb on - strand, within ABZR86_RS01410 at 302.936 kb on + strand, within ABZR86_RS01410 at 302.936 kb on + strand, within ABZR86_RS01410 at 302.937 kb on - strand, within ABZR86_RS01410 at 303.038 kb on + strand, within ABZR86_RS01410 at 303.057 kb on + strand, within ABZR86_RS01410 at 303.057 kb on + strand, within ABZR86_RS01410 at 303.277 kb on + strand at 303.278 kb on - strand at 303.278 kb on - strand at 303.292 kb on + strand at 303.293 kb on - strand at 303.293 kb on - strand at 303.293 kb on - strand at 303.293 kb on - strand at 303.293 kb on - strand at 303.293 kb on - strand at 303.299 kb on - strand at 303.398 kb on + strand at 303.398 kb on + strand at 303.398 kb on + strand at 303.399 kb on - strand at 303.399 kb on - strand at 303.399 kb on - strand at 303.399 kb on - strand at 303.402 kb on + strand at 303.402 kb on + strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.403 kb on - strand at 303.404 kb on + strand at 303.404 kb on + strand at 303.546 kb on + strand at 303.546 kb on + strand at 303.547 kb on - strand at 303.679 kb on - strand at 303.679 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 301,682 + ABZR86_RS01400 0.70 +1.0 301,682 + ABZR86_RS01400 0.70 -0.1 301,682 + ABZR86_RS01400 0.70 +0.3 301,682 + ABZR86_RS01400 0.70 +0.4 301,683 - ABZR86_RS01400 0.70 -0.0 301,700 + ABZR86_RS01400 0.73 +1.2 301,700 + ABZR86_RS01400 0.73 -0.1 301,701 - ABZR86_RS01400 0.74 +0.2 301,792 + -1.0 301,792 + +0.2 301,824 - +0.3 301,824 - -0.4 301,824 - -0.1 301,824 - +1.2 301,824 - +0.2 301,877 - -0.2 301,924 + +0.7 301,924 + +0.2 301,949 + +0.3 301,949 + -0.7 301,949 + -0.0 301,950 - -0.2 302,028 + ABZR86_RS01405 0.18 +0.5 302,029 - ABZR86_RS01405 0.18 +0.2 302,048 + ABZR86_RS01405 0.21 -0.9 302,049 - ABZR86_RS01405 0.21 -0.2 302,049 - ABZR86_RS01405 0.21 -2.6 302,049 - ABZR86_RS01405 0.21 -0.8 302,049 - ABZR86_RS01405 0.21 -0.5 302,049 - ABZR86_RS01405 0.21 +0.8 302,049 - ABZR86_RS01405 0.21 +1.3 302,171 - ABZR86_RS01405 0.39 +0.5 302,171 - ABZR86_RS01405 0.39 -0.0 302,171 - ABZR86_RS01405 0.39 +0.6 302,319 + ABZR86_RS01405 0.62 +0.1 302,320 - ABZR86_RS01405 0.62 +0.5 302,320 - ABZR86_RS01405 0.62 +0.1 302,320 - ABZR86_RS01405 0.62 -0.1 302,354 - ABZR86_RS01405 0.67 -0.1 302,878 + ABZR86_RS01410 0.47 +0.0 302,879 - ABZR86_RS01410 0.48 -0.7 302,936 + ABZR86_RS01410 0.56 -0.3 302,936 + ABZR86_RS01410 0.56 +0.8 302,937 - ABZR86_RS01410 0.57 -1.3 303,038 + ABZR86_RS01410 0.72 -0.8 303,057 + ABZR86_RS01410 0.75 -0.4 303,057 + ABZR86_RS01410 0.75 +0.4 303,277 + +1.7 303,278 - +0.4 303,278 - +0.3 303,292 + -0.1 303,293 - +0.7 303,293 - -0.3 303,293 - +0.3 303,293 - +0.7 303,293 - -0.7 303,293 - +0.1 303,299 - -1.1 303,398 + -0.4 303,398 + +0.6 303,398 + +0.3 303,399 - -0.1 303,399 - -0.2 303,399 - +0.4 303,399 - +0.0 303,402 + +0.2 303,402 + -0.5 303,403 - -0.1 303,403 - +0.0 303,403 - +0.3 303,403 - +0.5 303,403 - +0.3 303,403 - -0.0 303,403 - -0.0 303,403 - -0.2 303,403 - +0.6 303,403 - -0.0 303,404 + +0.2 303,404 + +0.4 303,546 + -0.1 303,546 + -0.5 303,547 - +0.0 303,679 - -0.1 303,679 - -0.3
Or see this region's nucleotide sequence