Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01200 and ABZR86_RS01205 are separated by 61 nucleotides ABZR86_RS01205 and ABZR86_RS01210 overlap by 4 nucleotides ABZR86_RS01210 and ABZR86_RS01215 are separated by 2 nucleotides
ABZR86_RS01200: ABZR86_RS01200 - sugar porter family MFS transporter, at 248,788 to 250,179
_RS01200
ABZR86_RS01205: ABZR86_RS01205 - D-galactanolactonase <small>(from data)</small>, at 250,241 to 251,143
_RS01205
ABZR86_RS01210: ABZR86_RS01210 - SDR family oxidoreductase, at 251,140 to 251,904
_RS01210
ABZR86_RS01215: ABZR86_RS01215 - galactonate dehydratase, at 251,907 to 253,055
_RS01215
Position (kb) 250
251
252 Strain fitness (log2 ratio) -1
0
1 at 249.357 kb on - strand, within ABZR86_RS01200 at 249.359 kb on + strand, within ABZR86_RS01200 at 249.360 kb on - strand, within ABZR86_RS01200 at 249.360 kb on - strand, within ABZR86_RS01200 at 249.677 kb on + strand, within ABZR86_RS01200 at 249.678 kb on - strand, within ABZR86_RS01200 at 249.738 kb on - strand, within ABZR86_RS01200 at 249.738 kb on - strand, within ABZR86_RS01200 at 249.738 kb on - strand, within ABZR86_RS01200 at 249.763 kb on - strand, within ABZR86_RS01200 at 249.789 kb on - strand, within ABZR86_RS01200 at 249.789 kb on - strand, within ABZR86_RS01200 at 250.122 kb on + strand at 250.122 kb on + strand at 250.122 kb on + strand at 250.124 kb on + strand at 250.124 kb on + strand at 250.124 kb on + strand at 250.124 kb on + strand at 250.125 kb on - strand at 250.125 kb on - strand at 250.125 kb on - strand at 250.389 kb on + strand, within ABZR86_RS01205 at 250.389 kb on + strand, within ABZR86_RS01205 at 250.389 kb on + strand, within ABZR86_RS01205 at 250.389 kb on + strand, within ABZR86_RS01205 at 250.389 kb on + strand, within ABZR86_RS01205 at 250.389 kb on + strand, within ABZR86_RS01205 at 250.390 kb on - strand, within ABZR86_RS01205 at 250.390 kb on - strand, within ABZR86_RS01205 at 250.390 kb on - strand, within ABZR86_RS01205 at 250.430 kb on - strand, within ABZR86_RS01205 at 250.430 kb on - strand, within ABZR86_RS01205 at 250.656 kb on + strand, within ABZR86_RS01205 at 250.656 kb on + strand, within ABZR86_RS01205 at 250.656 kb on + strand, within ABZR86_RS01205 at 250.657 kb on - strand, within ABZR86_RS01205 at 250.718 kb on - strand, within ABZR86_RS01205 at 251.064 kb on + strand at 251.065 kb on - strand at 251.065 kb on - strand at 251.110 kb on + strand at 251.111 kb on - strand at 251.144 kb on - strand at 251.144 kb on - strand at 251.423 kb on + strand, within ABZR86_RS01210 at 251.424 kb on - strand, within ABZR86_RS01210 at 251.424 kb on - strand, within ABZR86_RS01210 at 251.424 kb on - strand, within ABZR86_RS01210 at 251.583 kb on + strand, within ABZR86_RS01210 at 251.596 kb on - strand, within ABZR86_RS01210 at 251.889 kb on + strand at 251.890 kb on - strand at 251.990 kb on - strand at 251.990 kb on - strand at 252.041 kb on - strand, within ABZR86_RS01215 at 252.041 kb on - strand, within ABZR86_RS01215 at 252.052 kb on + strand, within ABZR86_RS01215 at 252.106 kb on + strand, within ABZR86_RS01215 at 252.107 kb on - strand, within ABZR86_RS01215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 249,357 - ABZR86_RS01200 0.41 +0.6 249,359 + ABZR86_RS01200 0.41 +0.7 249,360 - ABZR86_RS01200 0.41 -0.1 249,360 - ABZR86_RS01200 0.41 -1.0 249,677 + ABZR86_RS01200 0.64 +0.2 249,678 - ABZR86_RS01200 0.64 -0.4 249,738 - ABZR86_RS01200 0.68 +0.6 249,738 - ABZR86_RS01200 0.68 -0.7 249,738 - ABZR86_RS01200 0.68 -0.4 249,763 - ABZR86_RS01200 0.70 -0.1 249,789 - ABZR86_RS01200 0.72 +0.7 249,789 - ABZR86_RS01200 0.72 +0.7 250,122 + +0.5 250,122 + -1.0 250,122 + +0.7 250,124 + -0.2 250,124 + +0.3 250,124 + -0.4 250,124 + -0.6 250,125 - +0.1 250,125 - +0.1 250,125 - -0.1 250,389 + ABZR86_RS01205 0.16 -0.1 250,389 + ABZR86_RS01205 0.16 +0.3 250,389 + ABZR86_RS01205 0.16 -1.6 250,389 + ABZR86_RS01205 0.16 +0.4 250,389 + ABZR86_RS01205 0.16 +0.1 250,389 + ABZR86_RS01205 0.16 -0.4 250,390 - ABZR86_RS01205 0.17 -0.3 250,390 - ABZR86_RS01205 0.17 -0.7 250,390 - ABZR86_RS01205 0.17 +1.1 250,430 - ABZR86_RS01205 0.21 -0.5 250,430 - ABZR86_RS01205 0.21 -0.1 250,656 + ABZR86_RS01205 0.46 +0.4 250,656 + ABZR86_RS01205 0.46 -0.5 250,656 + ABZR86_RS01205 0.46 +0.2 250,657 - ABZR86_RS01205 0.46 -0.4 250,718 - ABZR86_RS01205 0.53 -0.1 251,064 + -0.4 251,065 - -0.1 251,065 - -0.9 251,110 + -1.3 251,111 - -0.2 251,144 - -0.1 251,144 - -0.6 251,423 + ABZR86_RS01210 0.37 +0.6 251,424 - ABZR86_RS01210 0.37 +0.1 251,424 - ABZR86_RS01210 0.37 -0.0 251,424 - ABZR86_RS01210 0.37 +1.4 251,583 + ABZR86_RS01210 0.58 +0.3 251,596 - ABZR86_RS01210 0.60 +0.8 251,889 + -0.8 251,890 - +0.5 251,990 - +0.0 251,990 - -1.5 252,041 - ABZR86_RS01215 0.12 -0.4 252,041 - ABZR86_RS01215 0.12 -0.9 252,052 + ABZR86_RS01215 0.13 +0.6 252,106 + ABZR86_RS01215 0.17 +0.3 252,107 - ABZR86_RS01215 0.17 -1.1
Or see this region's nucleotide sequence