Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3963

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
4,760,152	+		Shewana3_3961	0.40	-1.2
4,760,227	-		Shewana3_3961	0.51	+0.5
4,760,240	+		Shewana3_3961	0.53	-0.1
4,760,308	-		Shewana3_3961	0.63	-0.2
4,760,328	-		Shewana3_3961	0.66	+0.1
4,760,343	-		Shewana3_3961	0.68	+0.2
4,760,343	-		Shewana3_3961	0.68	-0.4
4,760,343	-		Shewana3_3961	0.68	+0.3
4,760,571	-				-0.5
4,760,590	+				+1.1
4,760,604	-				+0.3
4,760,606	+				+0.3
4,760,621	-		Shewana3_3962	0.12	+0.1
4,760,621	-		Shewana3_3962	0.12	+0.2
4,760,715	-		Shewana3_3962	0.32	+0.1
4,760,890	+		Shewana3_3962	0.70	-0.2
4,760,890	+		Shewana3_3962	0.70	-0.1
4,760,898	-		Shewana3_3962	0.71	-0.7
4,761,086	+				-0.0
4,761,104	-				-0.1
4,761,114	+				-1.2
4,761,115	+				-0.2
4,761,115	+				-0.7
4,761,123	-				+0.3
4,761,123	-				-0.2
4,761,123	-				-0.0
4,761,124	+				-0.4
4,761,131	+				+0.0
4,761,132	+				-0.4
4,761,132	+				+0.1
4,761,132	+				-0.4
4,761,140	-				+0.2
4,761,141	+				+0.3
4,761,157	-		Shewana3_3963	0.10	-0.1
4,761,161	-		Shewana3_3963	0.11	+0.7
4,761,235	-		Shewana3_3963	0.27	-0.1
4,761,260	+		Shewana3_3963	0.32	-1.7
4,761,264	-		Shewana3_3963	0.33	-0.3
4,761,275	+		Shewana3_3963	0.35	-0.4
4,761,277	+		Shewana3_3963	0.36	-0.8
4,761,282	+		Shewana3_3963	0.37	-1.0
4,761,282	+		Shewana3_3963	0.37	-1.1
4,761,300	+		Shewana3_3963	0.41	+0.4
4,761,318	-		Shewana3_3963	0.44	+0.6
4,761,327	+		Shewana3_3963	0.46	-0.7
4,761,327	+		Shewana3_3963	0.46	-1.3
4,761,335	-		Shewana3_3963	0.48	-0.2
4,761,337	+		Shewana3_3963	0.48	-0.1
4,761,337	+		Shewana3_3963	0.48	+0.5
4,761,337	+		Shewana3_3963	0.48	-1.4
4,761,337	+		Shewana3_3963	0.48	-0.5
4,761,345	-		Shewana3_3963	0.50	+0.6
4,761,345	-		Shewana3_3963	0.50	+0.1
4,761,347	-		Shewana3_3963	0.50	-0.2
4,761,362	+		Shewana3_3963	0.54	-1.6
4,761,366	+		Shewana3_3963	0.54	+0.4
4,761,370	-		Shewana3_3963	0.55	+0.0
4,761,373	+		Shewana3_3963	0.56	-0.9
4,761,380	+		Shewana3_3963	0.57	-1.5
4,761,462	+		Shewana3_3963	0.75	-0.5
4,761,469	-		Shewana3_3963	0.76	-0.6
4,761,492	+		Shewana3_3963	0.81	-0.7
4,761,521	-		Shewana3_3963	0.87	+0.9
4,761,526	+		Shewana3_3963	0.88	-0.2
4,761,534	-				+0.6
4,761,543	+				-1.3
4,761,543	+				-0.2
4,761,544	-				+0.6
4,761,544	-				+0.4
4,761,544	-				-0.1
4,761,551	+				+0.9
4,761,559	-				+0.7
4,761,576	+				-0.7
4,761,576	+				-0.5
4,761,579	-				+0.2
4,761,582	-				-0.0
4,761,582	-				+0.7
4,761,584	-				-0.1
4,761,584	-				-0.2
4,761,584	-				+0.4
4,761,584	-				+0.4
4,761,620	+				-1.6
4,761,628	-				-0.0
4,761,628	-				-0.3
4,761,628	-				-0.8
4,761,630	+				-0.7
4,761,642	+				-1.2
4,761,644	-				-0.1
4,761,889	+				-0.3
4,761,889	+				+0.1
4,761,892	+				+0.5
4,761,905	-				+0.0
4,761,912	-				-0.3
4,761,974	-				-0.1
4,761,977	+				-0.1
4,761,985	-				-0.6
4,762,026	-				-0.6
4,762,074	-				-1.1
4,762,088	+				-0.2
4,762,089	+				-0.2
4,762,158	-		Shewana3_3964	0.17	-0.3
4,762,206	+		Shewana3_3964	0.22	-0.4
4,762,251	+		Shewana3_3964	0.26	+1.3
4,762,291	-		Shewana3_3964	0.30	-1.4
4,762,292	-		Shewana3_3964	0.31	-0.1
4,762,292	-		Shewana3_3964	0.31	+0.3
4,762,292	-		Shewana3_3964	0.31	-0.4
4,762,316	+		Shewana3_3964	0.33	-1.1
4,762,323	+		Shewana3_3964	0.34	+0.6
4,762,341	+		Shewana3_3964	0.36	+0.3
4,762,341	+		Shewana3_3964	0.36	-0.4
4,762,341	+		Shewana3_3964	0.36	-0.3
4,762,341	+		Shewana3_3964	0.36	+0.7
4,762,342	+		Shewana3_3964	0.36	-0.5
4,762,349	-		Shewana3_3964	0.36	-0.5
4,762,349	-		Shewana3_3964	0.36	+0.3
4,762,350	-		Shewana3_3964	0.37	+0.3
4,762,350	-		Shewana3_3964	0.37	-1.1
4,762,382	+		Shewana3_3964	0.40	-0.9
4,762,382	+		Shewana3_3964	0.40	-0.6
4,762,390	-		Shewana3_3964	0.41	-0.2
4,762,411	+		Shewana3_3964	0.43	-0.2
4,762,413	+		Shewana3_3964	0.43	+1.4
4,762,421	-		Shewana3_3964	0.44	+0.5
4,762,440	+		Shewana3_3964	0.46	-0.9
4,762,440	+		Shewana3_3964	0.46	+0.2
4,762,466	-		Shewana3_3964	0.49	-0.2
4,762,514	+		Shewana3_3964	0.53	-0.1