Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3628
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
4,355,196 | - | Shewana3_3627 | 0.53 | -0.1 | |
4,355,227 | + | Shewana3_3627 | 0.56 | -0.2 | |
4,355,303 | + | Shewana3_3627 | 0.61 | +0.1 | |
4,355,380 | - | Shewana3_3627 | 0.66 | -1.1 | |
4,355,517 | + | Shewana3_3627 | 0.76 | +0.2 | |
4,355,691 | + | Shewana3_3627 | 0.88 | +0.5 | |
4,355,804 | + | +0.4 | |||
4,355,825 | + | +0.1 | |||
4,355,874 | + | -0.0 | |||
4,355,882 | - | +0.2 | |||
4,355,902 | - | +0.3 | |||
4,355,994 | + | -0.9 | |||
4,355,998 | - | +0.9 | |||
4,356,031 | + | -0.0 | |||
4,356,129 | - | -0.4 | |||
4,356,334 | + | Shewana3_3628 | 0.76 | -1.9 | |
4,356,381 | + | +1.7 | |||
4,356,388 | - | +0.3 | |||
4,356,455 | + | -0.9 | |||
4,356,461 | - | -1.3 | |||
4,356,477 | + | -1.1 | |||
4,356,614 | + | +0.4 | |||
4,356,816 | + | Shewana3_3629 | 0.20 | +0.9 | |
4,356,829 | + | Shewana3_3629 | 0.21 | +0.6 | |
4,357,239 | - | Shewana3_3629 | 0.70 | -0.5 | |
4,357,239 | - | Shewana3_3629 | 0.70 | -0.1 | |
4,357,268 | + | Shewana3_3629 | 0.73 | -0.8 | |
4,357,340 | + | Shewana3_3629 | 0.81 | -2.0 | |
4,357,348 | - | Shewana3_3629 | 0.82 | -0.2 |
Or see this region's nucleotide sequence