Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2342
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
2,817,524 | - | Shewana3_2341 | 0.89 | +0.4 | |
2,817,576 | + | +0.4 | |||
2,817,648 | - | -1.6 | |||
2,817,701 | + | -0.2 | |||
2,817,742 | + | -1.3 | |||
2,817,755 | + | -0.1 | |||
2,817,764 | - | -1.1 | |||
2,817,988 | + | +0.1 | |||
2,818,209 | - | Shewana3_2342 | 0.13 | +1.0 | |
2,818,287 | - | Shewana3_2342 | 0.35 | -0.6 | |
2,818,373 | + | Shewana3_2342 | 0.58 | -1.5 | |
2,818,373 | + | Shewana3_2342 | 0.58 | +0.4 | |
2,818,668 | + | -0.5 | |||
2,818,721 | - | +0.4 | |||
2,818,800 | - | Shewana3_2343 | 0.14 | -1.7 | |
2,818,856 | + | Shewana3_2343 | 0.18 | -0.3 | |
2,818,991 | - | Shewana3_2343 | 0.25 | +1.2 | |
2,819,109 | + | Shewana3_2343 | 0.32 | -0.3 | |
2,819,114 | + | Shewana3_2343 | 0.32 | -0.2 | |
2,819,117 | - | Shewana3_2343 | 0.32 | -1.2 |
Or see this region's nucleotide sequence