Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2341 and Shewana3_2342 are separated by 364 nucleotides Shewana3_2342 and Shewana3_2343 are separated by 22 nucleotides
Shewana3_2341: Shewana3_2341 - molybdopterin oxidoreductase (RefSeq), at 2,815,232 to 2,817,796
_2341
Shewana3_2342: Shewana3_2342 - arsenical resistance operon trans-acting repressor ArsD (RefSeq), at 2,818,161 to 2,818,523
_2342
Shewana3_2343: Shewana3_2343 - arsenite-activated ATPase ArsA (RefSeq), at 2,818,546 to 2,820,312
_2343
Position (kb)
2818
2819 Strain fitness (log2 ratio)
-1
0
1 at 2817.524 kb on - strand, within Shewana3_2341 at 2817.576 kb on + strand at 2817.648 kb on - strand at 2817.701 kb on + strand at 2817.742 kb on + strand at 2817.755 kb on + strand at 2817.764 kb on - strand at 2817.988 kb on + strand at 2818.209 kb on - strand, within Shewana3_2342 at 2818.287 kb on - strand, within Shewana3_2342 at 2818.373 kb on + strand, within Shewana3_2342 at 2818.373 kb on + strand, within Shewana3_2342 at 2818.668 kb on + strand at 2818.721 kb on - strand at 2818.800 kb on - strand, within Shewana3_2343 at 2818.856 kb on + strand, within Shewana3_2343 at 2818.991 kb on - strand, within Shewana3_2343 at 2819.109 kb on + strand, within Shewana3_2343 at 2819.114 kb on + strand, within Shewana3_2343 at 2819.117 kb on - strand, within Shewana3_2343
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.0625 vol% remove 2,817,524 - Shewana3_2341 0.89 +0.4 2,817,576 + +0.4 2,817,648 - -1.6 2,817,701 + -0.2 2,817,742 + -1.3 2,817,755 + -0.1 2,817,764 - -1.1 2,817,988 + +0.1 2,818,209 - Shewana3_2342 0.13 +1.0 2,818,287 - Shewana3_2342 0.35 -0.6 2,818,373 + Shewana3_2342 0.58 -1.5 2,818,373 + Shewana3_2342 0.58 +0.4 2,818,668 + -0.5 2,818,721 - +0.4 2,818,800 - Shewana3_2343 0.14 -1.7 2,818,856 + Shewana3_2343 0.18 -0.3 2,818,991 - Shewana3_2343 0.25 +1.2 2,819,109 + Shewana3_2343 0.32 -0.3 2,819,114 + Shewana3_2343 0.32 -0.2 2,819,117 - Shewana3_2343 0.32 -1.2
Or see this region's nucleotide sequence