Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1954
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
2,325,978 | - | +0.4 | |||
2,326,086 | + | -0.8 | |||
2,326,094 | - | +2.0 | |||
2,326,129 | + | +1.3 | |||
2,326,129 | + | +0.0 | |||
2,326,129 | + | +0.6 | |||
2,326,147 | - | -0.3 | |||
2,326,339 | - | Shewana3_1954 | 0.31 | +1.0 | |
2,326,369 | + | Shewana3_1954 | 0.35 | -2.8 | |
2,327,035 | + | -1.2 | |||
2,327,606 | + | +0.6 | |||
2,327,748 | + | ruvA | Shewana3_1956 | 0.22 | -2.8 |
2,327,758 | + | ruvA | Shewana3_1956 | 0.24 | +1.0 |
2,327,848 | - | ruvA | Shewana3_1956 | 0.39 | +2.0 |
Or see this region's nucleotide sequence