Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1860
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
2,201,252 | + | Shewana3_1859 | 0.54 | -2.0 | |
2,201,487 | + | Shewana3_1859 | 0.66 | +0.6 | |
2,201,622 | + | Shewana3_1859 | 0.72 | -0.0 | |
2,201,679 | + | Shewana3_1859 | 0.75 | +1.0 | |
2,201,850 | + | Shewana3_1859 | 0.83 | -0.1 | |
2,201,878 | - | Shewana3_1859 | 0.85 | +2.0 | |
2,202,012 | + | +0.3 | |||
2,202,101 | - | +0.4 | |||
2,202,106 | - | +2.0 | |||
2,202,429 | + | Shewana3_1860 | 0.36 | -0.6 | |
2,202,455 | - | Shewana3_1860 | 0.41 | +2.0 | |
2,202,485 | + | Shewana3_1860 | 0.47 | -1.0 | |
2,202,575 | + | Shewana3_1860 | 0.64 | -1.9 | |
2,202,689 | - | Shewana3_1860 | 0.86 | +1.0 | |
2,202,805 | + | +1.0 | |||
2,202,813 | - | -0.9 | |||
2,202,941 | - | +0.1 | |||
2,203,039 | + | Shewana3_1861 | 0.11 | -1.4 | |
2,203,096 | + | Shewana3_1861 | 0.14 | -0.3 | |
2,203,156 | + | Shewana3_1861 | 0.17 | -0.4 | |
2,203,176 | - | Shewana3_1861 | 0.18 | -0.1 | |
2,203,377 | + | Shewana3_1861 | 0.28 | +2.0 | |
2,203,405 | + | Shewana3_1861 | 0.30 | +0.4 | |
2,203,507 | + | Shewana3_1861 | 0.35 | -1.2 | |
2,203,507 | + | Shewana3_1861 | 0.35 | +0.4 | |
2,203,549 | + | Shewana3_1861 | 0.37 | -1.4 | |
2,203,695 | - | Shewana3_1861 | 0.45 | +0.3 |
Or see this region's nucleotide sequence