Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1509
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
1,756,857 | - | Shewana3_1508 | 0.50 | -0.4 | |
1,757,079 | - | Shewana3_1508 | 0.61 | +0.1 | |
1,757,362 | + | Shewana3_1508 | 0.76 | +0.3 | |
1,757,375 | + | Shewana3_1508 | 0.77 | -0.2 | |
1,757,390 | - | Shewana3_1508 | 0.78 | +1.9 | |
1,757,490 | - | Shewana3_1508 | 0.83 | -0.4 | |
1,757,699 | - | +2.3 | |||
1,757,816 | + | -0.1 | |||
1,757,872 | + | Shewana3_1509 | 0.10 | -0.1 | |
1,758,090 | - | Shewana3_1509 | 0.43 | -0.7 | |
1,758,147 | + | Shewana3_1509 | 0.51 | +0.9 | |
1,758,178 | + | Shewana3_1509 | 0.56 | +0.1 | |
1,758,178 | + | Shewana3_1509 | 0.56 | +0.3 | |
1,758,186 | - | Shewana3_1509 | 0.57 | -2.1 | |
1,758,435 | - | -0.2 | |||
1,758,664 | - | Shewana3_1510 | 0.13 | +0.4 | |
1,758,764 | - | Shewana3_1510 | 0.20 | -0.3 | |
1,758,774 | - | Shewana3_1510 | 0.20 | -0.6 | |
1,758,969 | + | Shewana3_1510 | 0.33 | +0.7 | |
1,759,054 | - | Shewana3_1510 | 0.39 | -1.8 | |
1,759,301 | - | Shewana3_1510 | 0.56 | -0.7 | |
1,759,440 | + | Shewana3_1510 | 0.65 | +1.2 |
Or see this region's nucleotide sequence