Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1364
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
1,576,754 | + | Shewana3_1363 | 0.28 | +0.2 | |
1,576,831 | - | Shewana3_1363 | 0.35 | +0.2 | |
1,576,912 | - | Shewana3_1363 | 0.42 | +1.8 | |
1,577,296 | + | Shewana3_1363 | 0.76 | -0.5 | |
1,577,377 | + | Shewana3_1363 | 0.83 | +1.1 | |
1,577,557 | - | +1.5 | |||
1,577,704 | - | Shewana3_1364 | 0.27 | +0.8 | |
1,577,836 | + | Shewana3_1364 | 0.52 | -0.3 | |
1,577,844 | - | Shewana3_1364 | 0.53 | -2.0 | |
1,578,064 | + | -0.1 | |||
1,578,107 | + | +0.4 | |||
1,578,254 | - | Shewana3_1365 | 0.12 | -0.2 | |
1,578,293 | + | Shewana3_1365 | 0.17 | +0.0 | |
1,578,402 | - | Shewana3_1365 | 0.31 | +0.2 | |
1,578,453 | + | Shewana3_1365 | 0.37 | -0.3 | |
1,578,485 | + | Shewana3_1365 | 0.41 | +0.0 | |
1,578,600 | - | Shewana3_1365 | 0.56 | +1.8 | |
1,578,804 | + | Shewana3_1365 | 0.81 | -0.4 | |
1,578,809 | - | Shewana3_1365 | 0.82 | +0.6 | |
1,578,814 | - | Shewana3_1365 | 0.83 | -1.0 | |
1,578,997 | + | -0.5 | |||
1,579,004 | + | -0.4 |
Or see this region's nucleotide sequence