Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0896
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
1,043,948 | - | Shewana3_0895 | 0.63 | -0.3 | |
1,043,982 | + | Shewana3_0895 | 0.65 | -0.3 | |
1,044,059 | - | Shewana3_0895 | 0.69 | +0.0 | |
1,044,136 | - | Shewana3_0895 | 0.73 | +0.4 | |
1,044,228 | - | Shewana3_0895 | 0.78 | +1.2 | |
1,044,477 | + | +0.6 | |||
1,044,479 | + | +1.0 | |||
1,044,505 | - | -2.1 | |||
1,044,608 | + | +0.3 | |||
1,044,608 | + | -0.4 | |||
1,044,673 | + | -1.0 | |||
1,044,679 | + | -1.2 | |||
1,044,681 | - | -2.0 | |||
1,045,120 | - | Shewana3_0896 | 0.12 | -0.3 | |
1,045,121 | + | Shewana3_0896 | 0.12 | +0.1 | |
1,045,412 | + | Shewana3_0896 | 0.31 | -0.8 | |
1,045,420 | - | Shewana3_0896 | 0.31 | -2.8 | |
1,046,559 | + | +1.1 | |||
1,046,593 | + | -0.6 | |||
1,046,601 | - | +0.3 | |||
1,046,601 | - | -0.1 | |||
1,046,668 | - | -0.1 | |||
1,046,733 | + | -0.2 | |||
1,047,022 | - | Shewana3_0897 | 0.19 | +1.3 | |
1,047,255 | - | Shewana3_0897 | 0.27 | -1.0 | |
1,047,355 | - | Shewana3_0897 | 0.31 | +0.1 | |
1,047,373 | + | Shewana3_0897 | 0.32 | -0.8 | |
1,047,373 | + | Shewana3_0897 | 0.32 | -1.2 | |
1,047,381 | - | Shewana3_0897 | 0.32 | +0.5 | |
1,047,391 | + | Shewana3_0897 | 0.33 | +0.4 | |
1,047,391 | + | Shewana3_0897 | 0.33 | +0.1 | |
1,047,391 | + | Shewana3_0897 | 0.33 | +0.1 | |
1,047,462 | + | Shewana3_0897 | 0.35 | +1.0 |
Or see this region's nucleotide sequence