Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4203

Experiment: 2-Furfuraldehyde 0.0625 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_4202 and Shewana3_4203 are separated by 178 nucleotides Shewana3_4202: Shewana3_4202 - hypothetical protein (RefSeq), at 65,058 to 66,125 _4202 Shewana3_4203: Shewana3_4203 - hypothetical protein (RefSeq), at 66,304 to 66,699 _4203 Position (kb) 66 67Strain fitness (log2 ratio) -2 -1 0 1at 65.401 kb on - strand, within Shewana3_4202at 65.424 kb on - strand, within Shewana3_4202at 65.573 kb on + strand, within Shewana3_4202at 65.642 kb on - strand, within Shewana3_4202at 65.643 kb on + strand, within Shewana3_4202at 65.705 kb on + strand, within Shewana3_4202at 65.713 kb on - strand, within Shewana3_4202at 65.825 kb on - strand, within Shewana3_4202at 65.968 kb on - strand, within Shewana3_4202at 66.140 kb on - strandat 66.234 kb on + strandat 66.332 kb on + strandat 66.508 kb on - strand, within Shewana3_4203at 66.517 kb on - strand, within Shewana3_4203at 66.703 kb on - strandat 66.731 kb on + strandat 66.731 kb on + strandat 66.739 kb on - strandat 66.784 kb on - strandat 66.815 kb on - strandat 66.903 kb on + strandat 67.102 kb on + strandat 67.150 kb on - strandat 67.150 kb on - strandat 67.240 kb on - strandat 67.293 kb on + strandat 67.314 kb on - strandat 67.314 kb on - strandat 67.335 kb on - strandat 67.394 kb on - strandat 67.394 kb on - strandat 67.601 kb on - strandat 67.649 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.0625 vol%
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65,401 - Shewana3_4202 0.32 +0.2
65,424 - Shewana3_4202 0.34 -0.3
65,573 + Shewana3_4202 0.48 -1.1
65,642 - Shewana3_4202 0.55 +0.3
65,643 + Shewana3_4202 0.55 -0.1
65,705 + Shewana3_4202 0.61 -1.5
65,713 - Shewana3_4202 0.61 +0.8
65,825 - Shewana3_4202 0.72 -0.2
65,968 - Shewana3_4202 0.85 +1.5
66,140 - -1.0
66,234 + +0.3
66,332 + +0.3
66,508 - Shewana3_4203 0.52 -0.1
66,517 - Shewana3_4203 0.54 +0.6
66,703 - +0.1
66,731 + -0.4
66,731 + -0.4
66,739 - -0.1
66,784 - -0.4
66,815 - +0.2
66,903 + +0.5
67,102 + -1.5
67,150 - -0.0
67,150 - +0.4
67,240 - +0.0
67,293 + -2.4
67,314 - -0.0
67,314 - +0.2
67,335 - +0.1
67,394 - -0.4
67,394 - +0.6
67,601 - +0.4
67,649 - +0.0

Or see this region's nucleotide sequence