Strain Fitness in Shewanella loihica PV-4 around Shew_3756

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
4,470,987	-		Shew_3754	0.65	+0.1
4,471,050	+		Shew_3754	0.75	-0.1
4,471,058	-		Shew_3754	0.76	+0.8
4,471,159	+				-0.1
4,471,167	-				-0.3
4,471,378	-		Shew_3755	0.19	-0.5
4,471,473	-		Shew_3755	0.39	-0.2
4,471,830	+				+0.2
4,471,921	+				-0.2
4,471,921	+				-0.2
4,472,050	+				-0.7
4,472,058	-				-0.0
4,472,058	-				-0.8
4,472,058	-				-0.2
4,472,087	-		Shew_3756	0.11	-0.4
4,472,241	+		Shew_3756	0.21	-0.1
4,472,284	-		Shew_3756	0.24	-1.5
4,472,400	+		Shew_3756	0.32	-0.4
4,472,647	-		Shew_3756	0.48	-0.2
4,472,744	+		Shew_3756	0.54	-0.6
4,472,744	+		Shew_3756	0.54	-0.6
4,472,845	+		Shew_3756	0.61	-1.1
4,472,853	-		Shew_3756	0.61	+0.7
4,472,868	-		Shew_3756	0.62	-0.2
4,472,911	-		Shew_3756	0.65	-0.5
4,472,968	+		Shew_3756	0.69	-0.5
4,473,177	+		Shew_3756	0.82	-0.4
4,473,368	+				-2.7
4,473,368	+				-0.5
4,473,368	+				-0.7
4,473,368	+				-1.1
4,473,376	-				-0.5
4,473,376	-				-1.5
4,473,421	-				+0.1
4,473,602	-				-0.9
4,473,631	-				-0.3
4,473,796	-		Shew_3757	0.19	-0.1
4,474,136	-		Shew_3757	0.39	-1.5
4,474,225	+		Shew_3757	0.45	-0.3
4,474,225	+		Shew_3757	0.45	-0.1
4,474,225	+		Shew_3757	0.45	+0.6
4,474,225	+		Shew_3757	0.45	-0.1
4,474,233	-		Shew_3757	0.45	+0.7
4,474,233	-		Shew_3757	0.45	-1.9
4,474,312	+		Shew_3757	0.50	+0.2
4,474,312	+		Shew_3757	0.50	-0.6