Strain Fitness in Shewanella loihica PV-4 around Shew_3389

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
4,037,585	+		Shew_3387	0.78	-0.0
4,037,625	-		Shew_3387	0.82	+0.8
4,037,676	+		Shew_3387	0.88	+0.3
4,037,683	-		Shew_3387	0.89	+0.3
4,037,683	-		Shew_3387	0.89	-0.0
4,037,711	-				-0.1
4,037,823	-				+0.0
4,037,823	-				+0.1
4,037,830	+				+0.1
4,038,122	+		Shew_3388	0.66	+0.2
4,038,312	+				+0.1
4,038,617	-				+0.1
4,038,969	-		Shew_3389	0.52	-0.4
4,039,229	-		Shew_3389	0.86	-0.6
4,039,292	-				+0.9
4,039,307	-				-0.1
4,039,407	+				+0.1
4,039,681	-		Shew_3390	0.36	-0.1
4,039,871	-		Shew_3390	0.61	+0.2
4,040,113	+				-1.0
4,040,121	-				+0.2
4,040,151	-				-0.4
4,040,248	-				-0.2