Strain Fitness in Shewanella loihica PV-4 around Shew_3357

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
4,005,409	-		Shew_3356	0.71	-0.2
4,005,584	-		Shew_3356	0.77	+0.1
4,005,632	+		Shew_3356	0.78	+0.5
4,005,694	+		Shew_3356	0.80	+0.2
4,005,734	-		Shew_3356	0.81	+0.1
4,005,864	-		Shew_3356	0.85	+0.9
4,005,932	-		Shew_3356	0.88	+0.2
4,005,934	+		Shew_3356	0.88	-0.3
4,005,944	+		Shew_3356	0.88	+1.0
4,005,962	-		Shew_3356	0.89	-0.3
4,006,056	+				-0.1
4,006,068	-				-1.4
4,006,090	-				+1.4
4,006,337	-				+0.4
4,006,676	-		Shew_3357	0.27	+0.1
4,006,754	+		Shew_3357	0.33	+0.6
4,007,006	+		Shew_3357	0.54	+0.2
4,007,086	+		Shew_3357	0.60	+0.4
4,007,109	-		Shew_3357	0.62	+0.8
4,007,155	+		Shew_3357	0.66	+3.7
4,007,327	-		Shew_3357	0.80	+0.2
4,007,375	+		Shew_3357	0.84	+0.0
4,007,462	+				+0.8
4,007,497	+				-0.2
4,007,712	+				+0.6
4,007,925	-		Shew_3358	0.21	+0.7
4,008,122	+		Shew_3358	0.36	-2.5
4,008,328	+		Shew_3358	0.52	-0.1