Strain Fitness in Shewanella loihica PV-4 around Shew_3262

Experiment: Chloramphenicol 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 5 mg/ml
3,899,392	-				+1.0
3,899,710	+		Shew_3261	0.28	-0.9
3,899,860	+		Shew_3261	0.51	+0.0
3,899,860	+		Shew_3261	0.51	-0.3
3,899,879	+		Shew_3261	0.54	+0.8
3,900,228	-				-0.2
3,900,278	-				+0.2
3,900,504	-		Shew_3262	0.63	-0.7
3,900,654	-				+0.1
3,900,715	+				+0.1
3,900,872	-				-0.0
3,900,872	-				+0.0
3,900,913	+				-0.3
3,901,012	-				-1.2
3,901,066	+		Shew_3263	0.12	+0.3
3,901,072	-		Shew_3263	0.13	+0.4
3,901,118	-		Shew_3263	0.15	-0.2
3,901,118	+		Shew_3263	0.15	+0.2
3,901,149	+		Shew_3263	0.17	+1.1
3,901,150	+		Shew_3263	0.17	-0.6
3,901,351	+		Shew_3263	0.28	+0.2
3,901,395	-		Shew_3263	0.30	-0.8
3,901,440	-		Shew_3263	0.33	-0.4